Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP1A1P05023 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ATP1A1P05023 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP1A1P05023 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ATP1A1P05023 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.03■□□□□ 0.48
ATP1A1P05023 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ATP1A1P05023 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP1A1P05023 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP1A1P05023 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ATP1A1P05023 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.03■□□□□ 0.48
ATP1A1P05023 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ATP1A1P05023 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ATP1A1P05023 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ATP1A1P05023 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 FAM220CP-201ENST00000395253 831 ntBASIC18.02■□□□□ 0.48
ATP1A1P05023 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.02■□□□□ 0.48
ATP1A1P05023 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.02■□□□□ 0.48
ATP1A1P05023 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.02■□□□□ 0.48
ATP1A1P05023 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ATP1A1P05023 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.02■□□□□ 0.48
ATP1A1P05023 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ATP1A1P05023 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP1A1P05023 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP1A1P05023 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP1A1P05023 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
ATP1A1P05023 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ATP1A1P05023 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
ATP1A1P05023 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
ATP1A1P05023 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ATP1A1P05023 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 TSSC2-201ENST00000450217 709 ntBASIC18.01■□□□□ 0.47
ATP1A1P05023 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP1A1P05023 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 AL353801.3-201ENST00000609898 542 ntBASIC18.01■□□□□ 0.47
ATP1A1P05023 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.01■□□□□ 0.47
ATP1A1P05023 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATP1A1P05023 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATP1A1P05023 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.01■□□□□ 0.47
ATP1A1P05023 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18■□□□□ 0.47
ATP1A1P05023 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
ATP1A1P05023 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18■□□□□ 0.47
ATP1A1P05023 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18■□□□□ 0.47
ATP1A1P05023 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATP1A1P05023 RN7SL606P-201ENST00000472779 293 ntBASIC18■□□□□ 0.47
ATP1A1P05023 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18■□□□□ 0.47
ATP1A1P05023 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
ATP1A1P05023 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
ATP1A1P05023 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18■□□□□ 0.47
ATP1A1P05023 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18■□□□□ 0.47
ATP1A1P05023 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18■□□□□ 0.47
ATP1A1P05023 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATP1A1P05023 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18■□□□□ 0.47
ATP1A1P05023 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18■□□□□ 0.47
ATP1A1P05023 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP1A1P05023 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms