Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDRT1O95170 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 AL645728.1-201ENST00000366221 2101 ntBASIC15.13■□□□□ 0.01
CDRT1O95170 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.13■□□□□ 0.01
CDRT1O95170 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.13■□□□□ 0.01
CDRT1O95170 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.13■□□□□ 0.01
CDRT1O95170 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDRT1O95170 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.13■□□□□ 0.01
CDRT1O95170 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.13■□□□□ 0.01
CDRT1O95170 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.13■□□□□ 0.01
CDRT1O95170 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.13■□□□□ 0.01
CDRT1O95170 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDRT1O95170 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
CDRT1O95170 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.12■□□□□ 0.01
CDRT1O95170 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CDRT1O95170 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDRT1O95170 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
CDRT1O95170 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CDRT1O95170 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDRT1O95170 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.12■□□□□ 0.01
CDRT1O95170 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.12■□□□□ 0.01
CDRT1O95170 TSPY12P-201ENST00000421279 868 ntBASIC15.12■□□□□ 0.01
CDRT1O95170 AL596275.1-201ENST00000423464 877 ntBASIC15.12■□□□□ 0.01
CDRT1O95170 KRT18P48-201ENST00000434763 852 ntBASIC15.12■□□□□ 0.01
CDRT1O95170 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.12■□□□□ 0.01
CDRT1O95170 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDRT1O95170 AP002414.2-201ENST00000591780 3365 ntBASIC15.11■□□□□ 0.01
CDRT1O95170 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
CDRT1O95170 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDRT1O95170 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.11■□□□□ 0.01
CDRT1O95170 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CDRT1O95170 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CDRT1O95170 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDRT1O95170 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.11■□□□□ 0.01
CDRT1O95170 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.11■□□□□ 0.01
CDRT1O95170 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDRT1O95170 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms