Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.16■□□□□ 0.18
PDLIM1O00151 MIR662-201ENST00000384847 95 ntBASIC16.16■□□□□ 0.18
PDLIM1O00151 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 VENTXP5-201ENST00000523979 775 ntBASIC16.16■□□□□ 0.18
PDLIM1O00151 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PDLIM1O00151 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.16■□□□□ 0.18
PDLIM1O00151 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.16■□□□□ 0.18
PDLIM1O00151 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PDLIM1O00151 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 AC005332.1-201ENST00000577698 1310 ntBASIC16.16■□□□□ 0.18
PDLIM1O00151 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.16■□□□□ 0.18
PDLIM1O00151 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PDLIM1O00151 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
PDLIM1O00151 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PDLIM1O00151 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM1O00151 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PDLIM1O00151 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 AC113404.2-201ENST00000507884 177 ntBASIC16.15■□□□□ 0.18
PDLIM1O00151 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM1O00151 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM1O00151 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM1O00151 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.15■□□□□ 0.18
PDLIM1O00151 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.15■□□□□ 0.18
PDLIM1O00151 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.15■□□□□ 0.18
PDLIM1O00151 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PDLIM1O00151 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.15■□□□□ 0.18
PDLIM1O00151 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
PDLIM1O00151 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM1O00151 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM1O00151 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 GRK6P1-201ENST00000400595 1711 ntBASIC16.14■□□□□ 0.17
PDLIM1O00151 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.14■□□□□ 0.17
PDLIM1O00151 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.14■□□□□ 0.17
PDLIM1O00151 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PDLIM1O00151 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PDLIM1O00151 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
PDLIM1O00151 AC116407.4-201ENST00000623319 1061 ntBASIC16.14■□□□□ 0.17
PDLIM1O00151 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PDLIM1O00151 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PDLIM1O00151 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.14■□□□□ 0.17
PDLIM1O00151 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms