Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.96□□□□□ -0.02
DNAAF1Q8NEP3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 AC007950.2-201ENST00000615045 2347 ntBASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 RCN1P1-201ENST00000400413 996 ntBASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 AL513523.2-202ENST00000427283 2040 ntBASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
DNAAF1Q8NEP3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 AL049757.1-201ENST00000616842 1596 ntBASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
DNAAF1Q8NEP3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
DNAAF1Q8NEP3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms