Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 RPS2P1-201ENST00000434010 821 ntBASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 AC105339.3-201ENST00000560043 636 ntBASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 SLC25A6P4-201ENST00000586535 553 ntBASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.38■□□□□ 0.21
NIPAL1Q6NVV3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 PCDHB17P-201ENST00000539533 2393 ntBASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NIPAL1Q6NVV3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 AC004817.3-201ENST00000602957 2129 ntBASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 FDX1P1-201ENST00000449115 551 ntBASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 AC136632.2-201ENST00000512891 861 ntBASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 AL121894.2-201ENST00000602977 491 ntBASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 FAM215A-202ENST00000632077 792 ntBASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NIPAL1Q6NVV3 PCDHA14-201ENST00000506751 2298 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms