Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 AKR1C7P-201ENST00000305623 895 ntBASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 AC103564.2-201ENST00000432853 1299 ntBASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 REXO1L6P-202ENST00000619970 1078 ntBASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 AC006116.8-202ENST00000587620 1550 ntBASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPRIN2Q6IMN6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 ABCD1P5-201ENST00000445663 754 ntBASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 EMBP1-201ENST00000458200 901 ntBASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPRIN2Q6IMN6 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPRIN2Q6IMN6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms