Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN12P56749 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CLDN12P56749 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 COX11P1-201ENST00000489116 835 ntBASIC14.77□□□□□ -0.05
CLDN12P56749 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.77□□□□□ -0.05
CLDN12P56749 AC011558.1-201ENST00000623459 338 ntBASIC14.77□□□□□ -0.05
CLDN12P56749 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN12P56749 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
CLDN12P56749 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CLDN12P56749 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CLDN12P56749 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN12P56749 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 Z83836.1-201ENST00000624605 1642 ntBASIC14.77□□□□□ -0.05
CLDN12P56749 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN12P56749 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.76□□□□□ -0.05
CLDN12P56749 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN12P56749 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLDN12P56749 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLDN12P56749 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN12P56749 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN12P56749 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN12P56749 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN12P56749 RNF126P1-202ENST00000569893 925 ntBASIC14.76□□□□□ -0.05
CLDN12P56749 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 AL031432.5-201ENST00000641059 760 ntBASIC14.76□□□□□ -0.05
CLDN12P56749 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN12P56749 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.76□□□□□ -0.05
CLDN12P56749 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN12P56749 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN12P56749 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
CLDN12P56749 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CLDN12P56749 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN12P56749 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN12P56749 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN12P56749 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN12P56749 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.75□□□□□ -0.05
CLDN12P56749 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CLDN12P56749 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.75□□□□□ -0.05
CLDN12P56749 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CLDN12P56749 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms