Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SMSP52788 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.91■□□□□ 0.14
SMSP52788 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.91■□□□□ 0.14
SMSP52788 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMSP52788 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SMSP52788 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.91■□□□□ 0.14
SMSP52788 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SMSP52788 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.9■□□□□ 0.14
SMSP52788 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 RNA5SP415-201ENST00000517246 115 ntBASIC15.9■□□□□ 0.14
SMSP52788 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 AC105339.3-201ENST00000560043 636 ntBASIC15.9■□□□□ 0.14
SMSP52788 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.9■□□□□ 0.14
SMSP52788 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SMSP52788 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
SMSP52788 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SMSP52788 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
SMSP52788 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
SMSP52788 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 FLJ38576-201ENST00000623820 2459 ntBASIC15.89■□□□□ 0.13
SMSP52788 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.89■□□□□ 0.13
SMSP52788 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
SMSP52788 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 AC034105.1-201ENST00000563488 319 ntBASIC15.89■□□□□ 0.13
SMSP52788 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.89■□□□□ 0.13
SMSP52788 AC010327.4-202ENST00000591484 748 ntBASIC15.89■□□□□ 0.13
SMSP52788 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 AC046185.3-201ENST00000623228 1824 ntBASIC15.89■□□□□ 0.13
SMSP52788 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SMSP52788 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SMSP52788 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMSP52788 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMSP52788 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMSP52788 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMSP52788 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMSP52788 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms