Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CTSDP07339 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CTSDP07339 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 AC211429.1-201ENST00000415277 523 ntBASIC14.09□□□□□ -0.15
CTSDP07339 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 AL359075.1-203ENST00000462729 1002 ntBASIC14.09□□□□□ -0.15
CTSDP07339 COX11P1-201ENST00000489116 835 ntBASIC14.09□□□□□ -0.15
CTSDP07339 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CTSDP07339 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.09□□□□□ -0.15
CTSDP07339 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CTSDP07339 AC104640.1-201ENST00000562617 2109 ntBASIC14.09□□□□□ -0.15
CTSDP07339 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.09□□□□□ -0.15
CTSDP07339 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.09□□□□□ -0.15
CTSDP07339 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CTSDP07339 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CTSDP07339 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CTSDP07339 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTSDP07339 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CTSDP07339 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.08□□□□□ -0.15
CTSDP07339 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CTSDP07339 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.08□□□□□ -0.16
CTSDP07339 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.08□□□□□ -0.16
CTSDP07339 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.08□□□□□ -0.16
CTSDP07339 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CTSDP07339 AL138831.2-201ENST00000606564 490 ntBASIC14.08□□□□□ -0.16
CTSDP07339 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CTSDP07339 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CTSDP07339 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.08□□□□□ -0.16
CTSDP07339 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms