Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SP110Q9HB58 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.36■□□□□ 0.37
SP110Q9HB58 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.36■□□□□ 0.37
SP110Q9HB58 AC010654.1-201ENST00000615722 808 ntBASIC17.36■□□□□ 0.37
SP110Q9HB58 BX640515.1-201ENST00000617215 977 ntBASIC17.36■□□□□ 0.37
SP110Q9HB58 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.36■□□□□ 0.37
SP110Q9HB58 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SP110Q9HB58 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SP110Q9HB58 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.36■□□□□ 0.37
SP110Q9HB58 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 AC104109.2-201ENST00000602919 1418 ntBASIC17.36■□□□□ 0.37
SP110Q9HB58 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
SP110Q9HB58 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SP110Q9HB58 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.35■□□□□ 0.37
SP110Q9HB58 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 AC005915.1-201ENST00000624912 2018 ntBASIC17.35■□□□□ 0.37
SP110Q9HB58 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SP110Q9HB58 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.35■□□□□ 0.37
SP110Q9HB58 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.35■□□□□ 0.37
SP110Q9HB58 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.35■□□□□ 0.37
SP110Q9HB58 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SP110Q9HB58 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.35■□□□□ 0.37
SP110Q9HB58 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.35■□□□□ 0.37
SP110Q9HB58 DUX4L17-201ENST00000557360 1267 ntBASIC17.35■□□□□ 0.37
SP110Q9HB58 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.35■□□□□ 0.37
SP110Q9HB58 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.35■□□□□ 0.37
SP110Q9HB58 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SP110Q9HB58 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.35■□□□□ 0.37
SP110Q9HB58 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SP110Q9HB58 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
SP110Q9HB58 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SP110Q9HB58 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SP110Q9HB58 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SP110Q9HB58 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.34■□□□□ 0.37
SP110Q9HB58 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
SP110Q9HB58 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
SP110Q9HB58 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.34■□□□□ 0.37
SP110Q9HB58 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.34■□□□□ 0.37
SP110Q9HB58 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SP110Q9HB58 RPL13AP23-201ENST00000480739 586 ntBASIC17.34■□□□□ 0.37
SP110Q9HB58 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.34■□□□□ 0.37
SP110Q9HB58 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SP110Q9HB58 AC022211.2-201ENST00000585075 2527 ntBASIC17.34■□□□□ 0.37
SP110Q9HB58 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 AC020916.1-201ENST00000587762 1774 ntBASIC17.34■□□□□ 0.37
SP110Q9HB58 KRT8P49-201ENST00000604166 1432 ntBASIC17.34■□□□□ 0.37
SP110Q9HB58 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SP110Q9HB58 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.34■□□□□ 0.37
SP110Q9HB58 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.34■□□□□ 0.37
SP110Q9HB58 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.34■□□□□ 0.37
SP110Q9HB58 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SP110Q9HB58 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.34■□□□□ 0.37
SP110Q9HB58 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SP110Q9HB58 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.33■□□□□ 0.37
SP110Q9HB58 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms