Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 AP000523.1-201ENST00000398242 1049 ntBASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 RBM17P1-201ENST00000453646 1190 ntBASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 FITM1-202ENST00000559294 800 ntBASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 AC111152.3-201ENST00000569699 673 ntBASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SMIM4Q8WVI0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 AC002310.6-201ENST00000624451 1377 ntBASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 TSPY14P-201ENST00000303979 915 ntBASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 AC034232.1-201ENST00000506026 1064 ntBASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 FAM45BP-202ENST00000592932 1624 ntBASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SMIM4Q8WVI0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SMIM4Q8WVI0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms