Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 FO538757.1-201ENST00000623083 1397 ntBASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 MIR3909-201ENST00000579518 119 ntBASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 AC008267.7-201ENST00000624570 1194 ntBASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 AC008761.3-201ENST00000624803 892 ntBASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 AC008677.1-201ENST00000519230 1561 ntBASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.18■□□□□ 0.34
SYNPOQ8N3V7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 AC069120.2-201ENST00000524091 540 ntBASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 SLC25A39P2-201ENST00000537614 270 ntBASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 BCL2-203ENST00000589955 5011 ntBASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 LINC02560-201ENST00000596379 459 ntBASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SYNPOQ8N3V7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 TREML5P-201ENST00000421694 576 ntBASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 IGHV3-42-201ENST00000520410 361 ntBASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.16■□□□□ 0.34
SYNPOQ8N3V7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms