Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 MIR935-201ENST00000401179 91 ntBASIC28.4■■■□□ 2.14
SNCAIPQ9Y6H5 KRT16P3-201ENST00000439127 1283 ntBASIC28.4■■■□□ 2.14
SNCAIPQ9Y6H5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.4■■■□□ 2.14
SNCAIPQ9Y6H5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SNCAIPQ9Y6H5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
SNCAIPQ9Y6H5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
SNCAIPQ9Y6H5 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SNCAIPQ9Y6H5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
SNCAIPQ9Y6H5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.38■■■□□ 2.13
SNCAIPQ9Y6H5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC28.38■■■□□ 2.13
SNCAIPQ9Y6H5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 AC137630.3-201ENST00000607245 391 ntBASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SNCAIPQ9Y6H5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNCAIPQ9Y6H5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.36■■■□□ 2.13
SNCAIPQ9Y6H5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
SNCAIPQ9Y6H5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SNCAIPQ9Y6H5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SNCAIPQ9Y6H5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNCAIPQ9Y6H5 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SNCAIPQ9Y6H5 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
SNCAIPQ9Y6H5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.35■■■□□ 2.13
SNCAIPQ9Y6H5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.35■■■□□ 2.13
SNCAIPQ9Y6H5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC28.35■■■□□ 2.13
SNCAIPQ9Y6H5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
SNCAIPQ9Y6H5 AC120024.1-201ENST00000562672 995 ntBASIC28.34■■■□□ 2.13
SNCAIPQ9Y6H5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC28.34■■■□□ 2.13
SNCAIPQ9Y6H5 AC021242.3-201ENST00000607598 1377 ntBASIC28.34■■■□□ 2.13
SNCAIPQ9Y6H5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
SNCAIPQ9Y6H5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNCAIPQ9Y6H5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNCAIPQ9Y6H5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
SNCAIPQ9Y6H5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.33■■■□□ 2.13
SNCAIPQ9Y6H5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNCAIPQ9Y6H5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC28.33■■■□□ 2.13
SNCAIPQ9Y6H5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
SNCAIPQ9Y6H5 TSPY9P-201ENST00000440215 945 ntBASIC28.32■■■□□ 2.12
SNCAIPQ9Y6H5 TSPY11P-201ENST00000442607 1045 ntBASIC28.32■■■□□ 2.12
SNCAIPQ9Y6H5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SNCAIPQ9Y6H5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
SNCAIPQ9Y6H5 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNCAIPQ9Y6H5 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNCAIPQ9Y6H5 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
SNCAIPQ9Y6H5 DRD5P2-201ENST00000421395 2012 ntBASIC28.31■■■□□ 2.12
SNCAIPQ9Y6H5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
SNCAIPQ9Y6H5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNCAIPQ9Y6H5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.3■■■□□ 2.12
SNCAIPQ9Y6H5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNCAIPQ9Y6H5 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNCAIPQ9Y6H5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNCAIPQ9Y6H5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.28■■■□□ 2.12
SNCAIPQ9Y6H5 MIR638-201ENST00000385237 100 ntBASIC28.28■■■□□ 2.12
SNCAIPQ9Y6H5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SNCAIPQ9Y6H5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC28.27■■■□□ 2.12
SNCAIPQ9Y6H5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.26■■■□□ 2.11
SNCAIPQ9Y6H5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.26■■■□□ 2.11
SNCAIPQ9Y6H5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNCAIPQ9Y6H5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.26■■■□□ 2.11
SNCAIPQ9Y6H5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNCAIPQ9Y6H5 BX255925.1-201ENST00000566954 1854 ntBASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.25■■■□□ 2.11
SNCAIPQ9Y6H5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNCAIPQ9Y6H5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.24■■■□□ 2.11
SNCAIPQ9Y6H5 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SNCAIPQ9Y6H5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.24■■■□□ 2.11
SNCAIPQ9Y6H5 LINC01003-201ENST00000564834 1764 ntBASIC28.24■■■□□ 2.11
SNCAIPQ9Y6H5 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 AC092028.1-203ENST00000608262 953 ntBASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNCAIPQ9Y6H5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.22■■■□□ 2.11
SNCAIPQ9Y6H5 AC131281.2-201ENST00000520478 145 ntBASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms