Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.13■□□□□ 0.65
LSM4Q9Y4Z0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LSM4Q9Y4Z0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 AC138932.3-201ENST00000567634 1902 ntBASIC19.12■□□□□ 0.65
LSM4Q9Y4Z0 AL139125.2-201ENST00000623134 1869 ntBASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.11■□□□□ 0.65
LSM4Q9Y4Z0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LSM4Q9Y4Z0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM4Q9Y4Z0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LSM4Q9Y4Z0 AC012354.3-201ENST00000623734 483 ntBASIC19.09■□□□□ 0.65
LSM4Q9Y4Z0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.09■□□□□ 0.65
LSM4Q9Y4Z0 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.09■□□□□ 0.65
LSM4Q9Y4Z0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LSM4Q9Y4Z0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LSM4Q9Y4Z0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
LSM4Q9Y4Z0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LSM4Q9Y4Z0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.08■□□□□ 0.65
LSM4Q9Y4Z0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LSM4Q9Y4Z0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.08■□□□□ 0.64
LSM4Q9Y4Z0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM4Q9Y4Z0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM4Q9Y4Z0 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LSM4Q9Y4Z0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LSM4Q9Y4Z0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LSM4Q9Y4Z0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 AC096887.2-201ENST00000623443 1957 ntBASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LSM4Q9Y4Z0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSM4Q9Y4Z0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
LSM4Q9Y4Z0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM4Q9Y4Z0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM4Q9Y4Z0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSM4Q9Y4Z0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
LSM4Q9Y4Z0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSM4Q9Y4Z0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.02■□□□□ 0.64
LSM4Q9Y4Z0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSM4Q9Y4Z0 AC148477.6-201ENST00000623746 465 ntBASIC19.02■□□□□ 0.64
LSM4Q9Y4Z0 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms