Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
ZFYVE28Q9HCC9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
ZFYVE28Q9HCC9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.96■■■□□ 2.07
ZFYVE28Q9HCC9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
ZFYVE28Q9HCC9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
ZFYVE28Q9HCC9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
ZFYVE28Q9HCC9 AC005837.3-201ENST00000612163 286 ntBASIC27.95■■■□□ 2.06
ZFYVE28Q9HCC9 AC110285.6-201ENST00000617652 491 ntBASIC27.95■■■□□ 2.06
ZFYVE28Q9HCC9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ZFYVE28Q9HCC9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ZFYVE28Q9HCC9 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
ZFYVE28Q9HCC9 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC27.94■■■□□ 2.06
ZFYVE28Q9HCC9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
ZFYVE28Q9HCC9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
ZFYVE28Q9HCC9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
ZFYVE28Q9HCC9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC27.94■■■□□ 2.06
ZFYVE28Q9HCC9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
ZFYVE28Q9HCC9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC27.93■■■□□ 2.06
ZFYVE28Q9HCC9 AL117332.1-201ENST00000622628 974 ntBASIC27.93■■■□□ 2.06
ZFYVE28Q9HCC9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
ZFYVE28Q9HCC9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.92■■■□□ 2.06
ZFYVE28Q9HCC9 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
ZFYVE28Q9HCC9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
ZFYVE28Q9HCC9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.92■■■□□ 2.06
ZFYVE28Q9HCC9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.92■■■□□ 2.06
ZFYVE28Q9HCC9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
ZFYVE28Q9HCC9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
ZFYVE28Q9HCC9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
ZFYVE28Q9HCC9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
ZFYVE28Q9HCC9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
ZFYVE28Q9HCC9 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
ZFYVE28Q9HCC9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
ZFYVE28Q9HCC9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.9■■■□□ 2.06
ZFYVE28Q9HCC9 MIR3621-201ENST00000580529 85 ntBASIC27.9■■■□□ 2.06
ZFYVE28Q9HCC9 AC010997.5-201ENST00000609182 354 ntBASIC27.9■■■□□ 2.06
ZFYVE28Q9HCC9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
ZFYVE28Q9HCC9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
ZFYVE28Q9HCC9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.05
ZFYVE28Q9HCC9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.05
ZFYVE28Q9HCC9 AC096631.2-201ENST00000436136 790 ntBASIC27.88■■■□□ 2.05
ZFYVE28Q9HCC9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
ZFYVE28Q9HCC9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 MIR6724-1-201ENST00000616420 92 ntBASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 MIR6724-2-201ENST00000616483 92 ntBASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 MIR6724-4-201ENST00000617390 92 ntBASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 MIR6724-3-201ENST00000622482 92 ntBASIC27.87■■■□□ 2.05
ZFYVE28Q9HCC9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC27.86■■■□□ 2.05
ZFYVE28Q9HCC9 AL356740.2-201ENST00000601559 647 ntBASIC27.86■■■□□ 2.05
ZFYVE28Q9HCC9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
ZFYVE28Q9HCC9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
ZFYVE28Q9HCC9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27.86■■■□□ 2.05
ZFYVE28Q9HCC9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.86■■■□□ 2.05
ZFYVE28Q9HCC9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC27.85■■■□□ 2.05
ZFYVE28Q9HCC9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC27.85■■■□□ 2.05
ZFYVE28Q9HCC9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
ZFYVE28Q9HCC9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.84■■■□□ 2.05
ZFYVE28Q9HCC9 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.84■■■□□ 2.05
ZFYVE28Q9HCC9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
ZFYVE28Q9HCC9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
ZFYVE28Q9HCC9 MIR4281-201ENST00000580852 62 ntBASIC27.84■■■□□ 2.05
ZFYVE28Q9HCC9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
ZFYVE28Q9HCC9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
ZFYVE28Q9HCC9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.83■■■□□ 2.05
ZFYVE28Q9HCC9 MTDHP2-201ENST00000601468 714 ntBASIC27.83■■■□□ 2.05
ZFYVE28Q9HCC9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ZFYVE28Q9HCC9 AC133561.4-201ENST00000566112 224 ntBASIC27.82■■■□□ 2.04
ZFYVE28Q9HCC9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.82■■■□□ 2.04
ZFYVE28Q9HCC9 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ZFYVE28Q9HCC9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.81■■■□□ 2.04
ZFYVE28Q9HCC9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC27.81■■■□□ 2.04
ZFYVE28Q9HCC9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
ZFYVE28Q9HCC9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
ZFYVE28Q9HCC9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
ZFYVE28Q9HCC9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.8■■■□□ 2.04
ZFYVE28Q9HCC9 MIR4466-201ENST00000606121 54 ntBASIC27.79■■■□□ 2.04
ZFYVE28Q9HCC9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
ZFYVE28Q9HCC9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
ZFYVE28Q9HCC9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC27.78■■■□□ 2.04
ZFYVE28Q9HCC9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ZFYVE28Q9HCC9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZFYVE28Q9HCC9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.77■■■□□ 2.04
ZFYVE28Q9HCC9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
ZFYVE28Q9HCC9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC27.77■■■□□ 2.04
ZFYVE28Q9HCC9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms