Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.07■■□□□ 1.76
RC3H2Q9HBD1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.07■■□□□ 1.76
RC3H2Q9HBD1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
RC3H2Q9HBD1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RC3H2Q9HBD1 AC008406.3-201ENST00000620001 1374 ntBASIC26.07■■□□□ 1.76
RC3H2Q9HBD1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.06■■□□□ 1.76
RC3H2Q9HBD1 DRD5P2-201ENST00000421395 2012 ntBASIC26.06■■□□□ 1.76
RC3H2Q9HBD1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.06■■□□□ 1.76
RC3H2Q9HBD1 AC137630.3-201ENST00000607245 391 ntBASIC26.06■■□□□ 1.76
RC3H2Q9HBD1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
RC3H2Q9HBD1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H2Q9HBD1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.05■■□□□ 1.76
RC3H2Q9HBD1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H2Q9HBD1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RC3H2Q9HBD1 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RC3H2Q9HBD1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RC3H2Q9HBD1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RC3H2Q9HBD1 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
RC3H2Q9HBD1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RC3H2Q9HBD1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H2Q9HBD1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H2Q9HBD1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H2Q9HBD1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RC3H2Q9HBD1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.03■■□□□ 1.76
RC3H2Q9HBD1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.02■■□□□ 1.76
RC3H2Q9HBD1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H2Q9HBD1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RC3H2Q9HBD1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.02■■□□□ 1.76
RC3H2Q9HBD1 AC021242.3-201ENST00000607598 1377 ntBASIC26.02■■□□□ 1.76
RC3H2Q9HBD1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H2Q9HBD1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RC3H2Q9HBD1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
RC3H2Q9HBD1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.01■■□□□ 1.75
RC3H2Q9HBD1 KRT16P3-201ENST00000439127 1283 ntBASIC26.01■■□□□ 1.75
RC3H2Q9HBD1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.01■■□□□ 1.75
RC3H2Q9HBD1 LINC01003-201ENST00000564834 1764 ntBASIC26■■□□□ 1.75
RC3H2Q9HBD1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26■■□□□ 1.75
RC3H2Q9HBD1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RC3H2Q9HBD1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26■■□□□ 1.75
RC3H2Q9HBD1 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RC3H2Q9HBD1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H2Q9HBD1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H2Q9HBD1 AC120024.1-201ENST00000562672 995 ntBASIC25.99■■□□□ 1.75
RC3H2Q9HBD1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H2Q9HBD1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RC3H2Q9HBD1 BX255925.1-201ENST00000566954 1854 ntBASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RC3H2Q9HBD1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H2Q9HBD1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H2Q9HBD1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H2Q9HBD1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H2Q9HBD1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC25.97■■□□□ 1.75
RC3H2Q9HBD1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H2Q9HBD1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H2Q9HBD1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
RC3H2Q9HBD1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
RC3H2Q9HBD1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RC3H2Q9HBD1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC25.95■■□□□ 1.74
RC3H2Q9HBD1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.95■■□□□ 1.74
RC3H2Q9HBD1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H2Q9HBD1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H2Q9HBD1 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC25.94■■□□□ 1.74
RC3H2Q9HBD1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.94■■□□□ 1.74
RC3H2Q9HBD1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H2Q9HBD1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RC3H2Q9HBD1 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
RC3H2Q9HBD1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.93■■□□□ 1.74
RC3H2Q9HBD1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.93■■□□□ 1.74
RC3H2Q9HBD1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.93■■□□□ 1.74
RC3H2Q9HBD1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.93■■□□□ 1.74
RC3H2Q9HBD1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RC3H2Q9HBD1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC25.92■■□□□ 1.74
RC3H2Q9HBD1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 AC142472.1-201ENST00000612013 1741 ntBASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H2Q9HBD1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 MIR638-201ENST00000385237 100 ntBASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
RC3H2Q9HBD1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
RC3H2Q9HBD1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RC3H2Q9HBD1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
RC3H2Q9HBD1 MIR935-201ENST00000401179 91 ntBASIC25.89■■□□□ 1.74
RC3H2Q9HBD1 TSPY9P-201ENST00000440215 945 ntBASIC25.89■■□□□ 1.74
RC3H2Q9HBD1 TSPY11P-201ENST00000442607 1045 ntBASIC25.89■■□□□ 1.74
RC3H2Q9HBD1 AC092028.1-203ENST00000608262 953 ntBASIC25.89■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms