Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
VPS16Q9H269 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS16Q9H269 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS16Q9H269 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS16Q9H269 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
VPS16Q9H269 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
VPS16Q9H269 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.35■■□□□ 1.81
VPS16Q9H269 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.34■■□□□ 1.81
VPS16Q9H269 AC126177.7-201ENST00000547904 679 ntBASIC26.34■■□□□ 1.81
VPS16Q9H269 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
VPS16Q9H269 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
VPS16Q9H269 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
VPS16Q9H269 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS16Q9H269 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC26.33■■□□□ 1.81
VPS16Q9H269 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
VPS16Q9H269 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
VPS16Q9H269 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VPS16Q9H269 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
VPS16Q9H269 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS16Q9H269 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS16Q9H269 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS16Q9H269 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
VPS16Q9H269 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.32■■□□□ 1.8
VPS16Q9H269 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
VPS16Q9H269 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS16Q9H269 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS16Q9H269 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS16Q9H269 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
VPS16Q9H269 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS16Q9H269 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
VPS16Q9H269 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.31■■□□□ 1.8
VPS16Q9H269 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS16Q9H269 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
VPS16Q9H269 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
VPS16Q9H269 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS16Q9H269 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
VPS16Q9H269 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
VPS16Q9H269 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.29■■□□□ 1.8
VPS16Q9H269 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.29■■□□□ 1.8
VPS16Q9H269 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
VPS16Q9H269 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS16Q9H269 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.28■■□□□ 1.8
VPS16Q9H269 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS16Q9H269 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
VPS16Q9H269 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.28■■□□□ 1.8
VPS16Q9H269 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.28■■□□□ 1.8
VPS16Q9H269 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
VPS16Q9H269 AL139125.2-201ENST00000623134 1869 ntBASIC26.28■■□□□ 1.8
VPS16Q9H269 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.27■■□□□ 1.8
VPS16Q9H269 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
VPS16Q9H269 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
VPS16Q9H269 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.26■■□□□ 1.79
VPS16Q9H269 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
VPS16Q9H269 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
VPS16Q9H269 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.26■■□□□ 1.79
VPS16Q9H269 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
VPS16Q9H269 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
VPS16Q9H269 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS16Q9H269 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS16Q9H269 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS16Q9H269 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
VPS16Q9H269 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS16Q9H269 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.24■■□□□ 1.79
VPS16Q9H269 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS16Q9H269 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS16Q9H269 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
VPS16Q9H269 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
VPS16Q9H269 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.23■■□□□ 1.79
VPS16Q9H269 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS16Q9H269 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS16Q9H269 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
VPS16Q9H269 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS16Q9H269 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
VPS16Q9H269 AC097639.1-201ENST00000565519 1891 ntBASIC26.21■■□□□ 1.79
VPS16Q9H269 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS16Q9H269 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
VPS16Q9H269 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.21■■□□□ 1.79
VPS16Q9H269 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
VPS16Q9H269 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
VPS16Q9H269 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
VPS16Q9H269 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS16Q9H269 AL157400.5-201ENST00000507624 621 ntBASIC26.2■■□□□ 1.78
VPS16Q9H269 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS16Q9H269 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
VPS16Q9H269 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.19■■□□□ 1.78
VPS16Q9H269 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
VPS16Q9H269 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
VPS16Q9H269 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms