Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 AC103724.3-201ENST00000564481 992 ntBASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 ERN1-208ENST00000606895 2068 ntBASIC8.22□□□□□ -1.09
KRTAP4-3Q9BYR4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP4-3Q9BYR4 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
KRTAP4-3Q9BYR4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC8.21□□□□□ -1.09
KRTAP4-3Q9BYR4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC8.21□□□□□ -1.09
KRTAP4-3Q9BYR4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 AC009299.2-201ENST00000482477 511 ntBASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
KRTAP4-3Q9BYR4 AL121749.1-202ENST00000609313 2153 ntBASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
KRTAP4-3Q9BYR4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 RPS2P7-201ENST00000447334 885 ntBASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 AC087393.1-201ENST00000582896 145 ntBASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
KRTAP4-3Q9BYR4 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 YBX1P4-201ENST00000392794 808 ntBASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
KRTAP4-3Q9BYR4 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
KRTAP4-3Q9BYR4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms