Protein–RNA interactions for Protein: Q8NC42

RNF149, E3 ubiquitin-protein ligase RNF149, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF149Q8NC42 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF149Q8NC42 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RNF149Q8NC42 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF149Q8NC42 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.53■■□□□ 1.84
RNF149Q8NC42 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF149Q8NC42 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.53■■□□□ 1.84
RNF149Q8NC42 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF149Q8NC42 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF149Q8NC42 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RNF149Q8NC42 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF149Q8NC42 KRT8P33-201ENST00000508125 1423 ntBASIC26.52■■□□□ 1.84
RNF149Q8NC42 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.84
RNF149Q8NC42 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF149Q8NC42 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF149Q8NC42 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF149Q8NC42 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF149Q8NC42 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.51■■□□□ 1.83
RNF149Q8NC42 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
RNF149Q8NC42 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.5■■□□□ 1.83
RNF149Q8NC42 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.5■■□□□ 1.83
RNF149Q8NC42 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.5■■□□□ 1.83
RNF149Q8NC42 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 KRT18P10-201ENST00000388836 1287 ntBASIC26.5■■□□□ 1.83
RNF149Q8NC42 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RNF149Q8NC42 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
RNF149Q8NC42 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF149Q8NC42 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF149Q8NC42 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF149Q8NC42 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF149Q8NC42 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.48■■□□□ 1.83
RNF149Q8NC42 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF149Q8NC42 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.48■■□□□ 1.83
RNF149Q8NC42 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.48■■□□□ 1.83
RNF149Q8NC42 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RNF149Q8NC42 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF149Q8NC42 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF149Q8NC42 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.47■■□□□ 1.83
RNF149Q8NC42 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RNF149Q8NC42 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.47■■□□□ 1.83
RNF149Q8NC42 AC103834.1-201ENST00000520383 144 ntBASIC26.47■■□□□ 1.83
RNF149Q8NC42 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RNF149Q8NC42 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RNF149Q8NC42 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.47■■□□□ 1.83
RNF149Q8NC42 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.46■■□□□ 1.83
RNF149Q8NC42 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF149Q8NC42 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.46■■□□□ 1.83
RNF149Q8NC42 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.46■■□□□ 1.83
RNF149Q8NC42 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RNF149Q8NC42 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RNF149Q8NC42 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RNF149Q8NC42 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RNF149Q8NC42 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RNF149Q8NC42 LONRF2P2-201ENST00000439212 571 ntBASIC26.45■■□□□ 1.82
RNF149Q8NC42 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.45■■□□□ 1.82
RNF149Q8NC42 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.44■■□□□ 1.82
RNF149Q8NC42 AC019171.1-201ENST00000601251 1056 ntBASIC26.44■■□□□ 1.82
RNF149Q8NC42 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
RNF149Q8NC42 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RNF149Q8NC42 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF149Q8NC42 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RNF149Q8NC42 YBX1P4-201ENST00000392794 808 ntBASIC26.43■■□□□ 1.82
RNF149Q8NC42 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
RNF149Q8NC42 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
RNF149Q8NC42 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RNF149Q8NC42 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
RNF149Q8NC42 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.42■■□□□ 1.82
RNF149Q8NC42 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF149Q8NC42 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.41■■□□□ 1.82
RNF149Q8NC42 MIR4508-201ENST00000584178 70 ntBASIC26.41■■□□□ 1.82
RNF149Q8NC42 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
RNF149Q8NC42 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNF149Q8NC42 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.4■■□□□ 1.82
RNF149Q8NC42 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
RNF149Q8NC42 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.4■■□□□ 1.82
RNF149Q8NC42 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
RNF149Q8NC42 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
RNF149Q8NC42 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
RNF149Q8NC42 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF149Q8NC42 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
RNF149Q8NC42 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
RNF149Q8NC42 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
RNF149Q8NC42 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.38■■□□□ 1.81
RNF149Q8NC42 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
RNF149Q8NC42 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RNF149Q8NC42 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF149Q8NC42 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
RNF149Q8NC42 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RNF149Q8NC42 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF149Q8NC42 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RNF149Q8NC42 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
RNF149Q8NC42 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.37■■□□□ 1.81
RNF149Q8NC42 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.37■■□□□ 1.81
RNF149Q8NC42 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
RNF149Q8NC42 AL451085.2-201ENST00000605085 799 ntBASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms