Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
NPAS4Q8IUM7 KRT18P24-201ENST00000344739 1156 ntBASIC26.15■■□□□ 1.78
NPAS4Q8IUM7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
NPAS4Q8IUM7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
NPAS4Q8IUM7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.15■■□□□ 1.78
NPAS4Q8IUM7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NPAS4Q8IUM7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.78
NPAS4Q8IUM7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
NPAS4Q8IUM7 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.14■■□□□ 1.78
NPAS4Q8IUM7 MIR4787-201ENST00000607364 84 ntBASIC26.14■■□□□ 1.78
NPAS4Q8IUM7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 BX255925.1-201ENST00000566954 1854 ntBASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
NPAS4Q8IUM7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NPAS4Q8IUM7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.12■■□□□ 1.77
NPAS4Q8IUM7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.12■■□□□ 1.77
NPAS4Q8IUM7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
NPAS4Q8IUM7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NPAS4Q8IUM7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
NPAS4Q8IUM7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
NPAS4Q8IUM7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
NPAS4Q8IUM7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.11■■□□□ 1.77
NPAS4Q8IUM7 AC142472.1-201ENST00000612013 1741 ntBASIC26.11■■□□□ 1.77
NPAS4Q8IUM7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
NPAS4Q8IUM7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
NPAS4Q8IUM7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC26.08■■□□□ 1.77
NPAS4Q8IUM7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.08■■□□□ 1.77
NPAS4Q8IUM7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
NPAS4Q8IUM7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.08■■□□□ 1.77
NPAS4Q8IUM7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
NPAS4Q8IUM7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.07■■□□□ 1.76
NPAS4Q8IUM7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPAS4Q8IUM7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPAS4Q8IUM7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
NPAS4Q8IUM7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPAS4Q8IUM7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.06■■□□□ 1.76
NPAS4Q8IUM7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
NPAS4Q8IUM7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
NPAS4Q8IUM7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
NPAS4Q8IUM7 UNC93B8-201ENST00000511903 705 ntBASIC26.05■■□□□ 1.76
NPAS4Q8IUM7 AC137630.3-201ENST00000607245 391 ntBASIC26.05■■□□□ 1.76
NPAS4Q8IUM7 AC008406.3-201ENST00000620001 1374 ntBASIC26.05■■□□□ 1.76
NPAS4Q8IUM7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 AC120024.1-201ENST00000562672 995 ntBASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.04■■□□□ 1.76
NPAS4Q8IUM7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
NPAS4Q8IUM7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 KRT16P3-201ENST00000439127 1283 ntBASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
NPAS4Q8IUM7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
NPAS4Q8IUM7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.01■■□□□ 1.75
NPAS4Q8IUM7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.01■■□□□ 1.75
NPAS4Q8IUM7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26■■□□□ 1.75
NPAS4Q8IUM7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26■■□□□ 1.75
NPAS4Q8IUM7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26■■□□□ 1.75
NPAS4Q8IUM7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
NPAS4Q8IUM7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
NPAS4Q8IUM7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC25.99■■□□□ 1.75
NPAS4Q8IUM7 AC021242.3-201ENST00000607598 1377 ntBASIC25.99■■□□□ 1.75
NPAS4Q8IUM7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
NPAS4Q8IUM7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
NPAS4Q8IUM7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.99■■□□□ 1.75
NPAS4Q8IUM7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms