Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 LIG1-214ENST00000597146 589 ntTSL 234.34■■■■□ 3.095e-6■■■■□ 22.2
PABPN1Q86U42 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC33.77■■■■□ 33e-11■■■■□ 22.2
PABPN1Q86U42 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.875e-6■■■■□ 22.2
PABPN1Q86U42 PPP5C-206ENST00000486994 2209 ntTSL 232.54■■■□□ 2.83e-11■■■■□ 22.2
PABPN1Q86U42 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.645e-6■■■■□ 22.2
PABPN1Q86U42 CENPT-225ENST00000567985 575 ntTSL 431.16■■■□□ 2.585e-6■■■■□ 22.2
PABPN1Q86U42 PPFIA3-213ENST00000602905 799 ntTSL 231.08■■■□□ 2.575e-6■■■■□ 22.2
PABPN1Q86U42 PNKP-202ENST00000593706 849 ntTSL 331.01■■■□□ 2.555e-6■■■■□ 22.2
PABPN1Q86U42 SARS2-209ENST00000598563 506 ntTSL 330.8■■■□□ 2.525e-6■■■■□ 22.2
PABPN1Q86U42 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.465e-6■■■■□ 22.2
PABPN1Q86U42 PLEKHJ1-208ENST00000588450 2858 ntTSL 230.2■■■□□ 2.435e-6■■■■□ 22.2
PABPN1Q86U42 PNKP-221ENST00000627317 767 ntTSL 529.28■■■□□ 2.285e-6■■■■□ 22.2
PABPN1Q86U42 AKR1A1-205ENST00000473038 948 ntTSL 229.1■■■□□ 2.252e-6■■■■□ 22.2
PABPN1Q86U42 LIG1-218ENST00000599322 620 ntTSL 228.61■■■□□ 2.175e-6■■■■□ 22.2
PABPN1Q86U42 PNKP-223ENST00000629179 811 ntTSL 428.51■■■□□ 2.155e-6■■■■□ 22.2
PABPN1Q86U42 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.122e-6■■■■□ 22.2
PABPN1Q86U42 PPP5C-205ENST00000478046 1886 ntTSL 1 (best)27.84■■■□□ 2.053e-11■■■■□ 22.2
PABPN1Q86U42 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 25e-6■■■■□ 22.2
PABPN1Q86U42 CPNE1-206ENST00000412056 998 ntTSL 327.14■■□□□ 1.945e-6■■■■□ 22.2
PABPN1Q86U42 SPOUT1-204ENST00000467582 898 ntTSL 226.99■■□□□ 1.915e-6■■■■□ 22.2
PABPN1Q86U42 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.855e-6■■■■□ 22.2
PABPN1Q86U42 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC26.05■■□□□ 1.765e-6■■■■□ 22.2
PABPN1Q86U42 PNKP-204ENST00000594661 2111 ntTSL 225.95■■□□□ 1.745e-6■■■■□ 22.2
PABPN1Q86U42 PPFIA3-206ENST00000602655 3493 ntTSL 1 (best)25.45■■□□□ 1.675e-6■■■■□ 22.2
PABPN1Q86U42 SARS2-214ENST00000602034 498 ntTSL 325.11■■□□□ 1.615e-6■■■■□ 22.2
PABPN1Q86U42 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.595e-6■■■■□ 22.2
PABPN1Q86U42 CC2D1A-207ENST00000589224 809 ntTSL 324.91■■□□□ 1.585e-6■■■■□ 22.2
PABPN1Q86U42 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.535e-6■■■■□ 22.2
PABPN1Q86U42 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.55e-6■■■■□ 22.2
PABPN1Q86U42 AKR1A1-206ENST00000475919 630 ntTSL 224.3■■□□□ 1.482e-6■■■■□ 22.2
PABPN1Q86U42 POLE-209ENST00000536445 2334 ntTSL 323.94■■□□□ 1.425e-6■■■■□ 22.2
PABPN1Q86U42 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC23.63■■□□□ 1.375e-6■■■■□ 22.2
PABPN1Q86U42 PPP5C-207ENST00000487483 4675 ntTSL 523.1■■□□□ 1.293e-11■■■■□ 22.2
PABPN1Q86U42 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC22.87■■□□□ 1.255e-6■■■■□ 22.2
PABPN1Q86U42 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.195e-6■■■■□ 22.2
PABPN1Q86U42 USF1-201ENST00000368019 998 ntTSL 5 BASIC22.28■■□□□ 1.165e-6■■■■□ 22.2
PABPN1Q86U42 AKR1A1-213ENST00000497973 667 ntTSL 222.19■■□□□ 1.142e-6■■■■□ 22.2
PABPN1Q86U42 AKR1A1-211ENST00000495913 421 ntTSL 322.01■■□□□ 1.112e-6■■■■□ 22.2
PABPN1Q86U42 CAPN1-225ENST00000533704 643 ntTSL 321.25■□□□□ 0.995e-6■■■■□ 22.2
PABPN1Q86U42 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.915e-6■■■■□ 22.2
PABPN1Q86U42 CYB5B-204ENST00000515314 1658 ntTSL 5 BASIC20.72■□□□□ 0.915e-6■■■■□ 22.2
PABPN1Q86U42 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.875e-6■■■■□ 22.2
PABPN1Q86U42 SRSF9-204ENST00000548792 1446 ntTSL 218.99■□□□□ 0.635e-6■■■■□ 22.2
PABPN1Q86U42 USF1-204ENST00000472217 1097 ntTSL 218.49■□□□□ 0.555e-6■■■■□ 22.2
PABPN1Q86U42 CYB5B-205ENST00000561792 823 ntTSL 5 BASIC17.57■□□□□ 0.45e-6■■■■□ 22.2
PABPN1Q86U42 CPT1A-206ENST00000540367 2496 ntTSL 1 (best) BASIC17.44■□□□□ 0.385e-6■■■■□ 22.2
PABPN1Q86U42 AKR1A1-210ENST00000487654 552 ntTSL 216.47■□□□□ 0.232e-6■■■■□ 22.2
PABPN1Q86U42 SCFD1-216ENST00000555550 541 ntTSL 415.54■□□□□ 0.085e-6■■■■□ 22.2
PABPN1Q86U42 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.065e-6■■■■□ 22.2
PABPN1Q86U42 SCFD1-218ENST00000556256 428 ntTSL 215.24■□□□□ 0.035e-6■■■■□ 22.2
PABPN1Q86U42 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.125e-6■■■■□ 22.2
PABPN1Q86U42 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.145e-6■■■■□ 22.2
PABPN1Q86U42 SRSF9-203ENST00000548326 1704 nt13.64□□□□□ -0.235e-6■■■■□ 22.2
PABPN1Q86U42 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.275e-6■■■■□ 22.2
PABPN1Q86U42 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC12.34□□□□□ -0.435e-6■■■■□ 22.2
PABPN1Q86U42 CYB5B-206ENST00000568237 577 ntTSL 511.37□□□□□ -0.595e-6■■■■□ 22.2
PABPN1Q86U42 CASC3-202ENST00000394114 2792 ntTSL 210.19□□□□□ -0.785e-6■■■■□ 22.2
PABPN1Q86U42 SUN1-235ENST00000497943 2824 ntTSL 227.56■■■□□ 21e-12■■■■□ 22.2
PABPN1Q86U42 COL27A1-202ENST00000451716 2865 ntTSL 1 (best)19.73■□□□□ 0.753e-9■■■■□ 22.2
PABPN1Q86U42 MST1-201ENST00000448220 667 ntTSL 526.24■■□□□ 1.792e-14■■■■□ 22.1
PABPN1Q86U42 CENPT-226ENST00000568069 507 ntTSL 442.33■■■■■ 4.372e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-204ENST00000562338 583 ntTSL 436.11■■■■□ 3.372e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-223ENST00000566758 858 ntTSL 532.01■■■□□ 2.712e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-221ENST00000565713 822 ntTSL 230.2■■■□□ 2.432e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-206ENST00000562483 652 ntTSL 329.69■■■□□ 2.342e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-222ENST00000566067 631 ntTSL 329.29■■■□□ 2.282e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-205ENST00000562462 1005 ntTSL 226.89■■□□□ 1.92e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-211ENST00000564128 2673 ntTSL 224.75■■□□□ 1.552e-6■■■■□ 22.1
PABPN1Q86U42 CENPT-214ENST00000564538 501 ntTSL 421■□□□□ 0.952e-6■■■■□ 22.1
PABPN1Q86U42 GET4-206ENST00000464468 676 ntTSL 334.9■■■■□ 3.183e-8■■■■□ 22.1
PABPN1Q86U42 PIEZO1-205ENST00000472168 663 ntTSL 232.56■■■□□ 2.83e-6■■■■□ 22.1
PABPN1Q86U42 FANCA-231ENST00000568626 727 ntTSL 322.63■■□□□ 1.219e-8■■■■□ 22.1
PABPN1Q86U42 MMS19-206ENST00000434392 882 ntTSL 531.54■■■□□ 2.641e-7■■■■□ 22.1
PABPN1Q86U42 MAPK8IP3-208ENST00000564868 870 ntTSL 335.99■■■■□ 3.353e-8■■■■□ 22
PABPN1Q86U42 LINC00982-201ENST00000321336 664 ntTSL 1 (best)43.86■■■■■ 4.613e-6■■■■□ 22
PABPN1Q86U42 LRSAM1-205ENST00000472068 850 ntTSL 531.06■■■□□ 2.563e-6■■■■□ 22
PABPN1Q86U42 LRSAM1-209ENST00000498513 868 ntTSL 527.46■■□□□ 1.993e-6■■■■□ 22
PABPN1Q86U42 DCAF11-218ENST00000559144 1011 ntTSL 226.96■■□□□ 1.913e-6■■■■□ 22
PABPN1Q86U42 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.753e-6■■■■□ 22
PABPN1Q86U42 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC25.83■■□□□ 1.733e-6■■■■□ 22
PABPN1Q86U42 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.593e-6■■■■□ 22
PABPN1Q86U42 DCAF11-215ENST00000558914 2342 ntTSL 224.11■■□□□ 1.453e-6■■■■□ 22
PABPN1Q86U42 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.433e-6■■■■□ 22
PABPN1Q86U42 KDELR2-205ENST00000463747 376 ntTSL 523.14■■□□□ 1.293e-6■■■■□ 22
PABPN1Q86U42 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC21.95■■□□□ 1.13e-6■■■■□ 22
PABPN1Q86U42 LINC00982-206ENST00000445317 4247 ntTSL 521.91■■□□□ 1.13e-6■■■■□ 22
PABPN1Q86U42 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC20.84■□□□□ 0.933e-6■■■■□ 22
PABPN1Q86U42 DCAF11-212ENST00000558624 2627 ntTSL 220.44■□□□□ 0.863e-6■■■■□ 22
PABPN1Q86U42 KDELR2-202ENST00000382267 583 ntTSL 419.12■□□□□ 0.653e-6■■■■□ 22
PABPN1Q86U42 DCAF11-205ENST00000557802 4202 ntTSL 1 (best)18.93■□□□□ 0.623e-6■■■■□ 22
PABPN1Q86U42 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC18.83■□□□□ 0.63e-6■■■■□ 22
PABPN1Q86U42 DCAF11-201ENST00000326009 2570 ntTSL 1 (best)18.54■□□□□ 0.563e-6■■■■□ 22
PABPN1Q86U42 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.433e-6■■■■□ 22
PABPN1Q86U42 VMP1-216ENST00000592790 4325 nt4.89□□□□□ -1.633e-6■■■■□ 22
PABPN1Q86U42 RHOT2-202ENST00000561711 644 ntTSL 345.93■■■■■ 4.947e-8■■■■□ 22
PABPN1Q86U42 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC40.69■■■■■ 4.11e-6■■■■□ 22
PABPN1Q86U42 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.041e-6■■■■□ 22
PABPN1Q86U42 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC32.37■■■□□ 2.771e-6■■■■□ 22
PABPN1Q86U42 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.771e-6■■■■□ 22
PABPN1Q86U42 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC28.11■■■□□ 2.091e-6■■■■□ 22
Retrieved 100 of 8,254 protein–RNA pairs in 134.4 ms