RNA–Protein interactions for RNA: ENST00000548792.1

SRSF9-204, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 2

Gene SRSF9, Length 1,446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-204ENST00000548792 AEBP2Q6ZN18 517 aaPredicted RBP25.42■■□□□ 1.66
SRSF9-204ENST00000548792 CHIC1Q5VXU3 224 aa24.75■■□□□ 1.55
SRSF9-204ENST00000548792 NISCHQ9Y2I1 1504 aa22.87■■□□□ 1.25
SRSF9-204ENST00000548792 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
SRSF9-204ENST00000548792 SENP3Q9H4L4 574 aaPredicted RBP21.62■■□□□ 1.05
SRSF9-204ENST00000548792 POTEDQ86YR6 584 aa20.77■□□□□ 0.91
SRSF9-204ENST00000548792 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
SRSF9-204ENST00000548792 ABCC9O60706 1549 aa20.43■□□□□ 0.86
SRSF9-204ENST00000548792 FOXD1Q16676 465 aa20.27■□□□□ 0.83
SRSF9-204ENST00000548792 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
SRSF9-204ENST00000548792 RB1CC1Q8TDY2 1594 aa19.51■□□□□ 0.71
SRSF9-204ENST00000548792 MSH5O43196 834 aa19.39■□□□□ 0.69
SRSF9-204ENST00000548792 NACADO15069 1562 aa19.38■□□□□ 0.69
SRSF9-204ENST00000548792 PPP6R1Q9UPN7 881 aa19.25■□□□□ 0.67
SRSF9-204ENST00000548792 DCAF8L2P0C7V8 631 aa19.23■□□□□ 0.67
SRSF9-204ENST00000548792 ADRA2BP18089 450 aa19.2■□□□□ 0.66
SRSF9-204ENST00000548792 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
SRSF9-204ENST00000548792 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
SRSF9-204ENST00000548792 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
SRSF9-204ENST00000548792 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.635e-6■■■■□ 22.2
SRSF9-204ENST00000548792 ZCCHC6Q5VYS8 1495 aaKnown RBP18.98■□□□□ 0.63
SRSF9-204ENST00000548792 BICRAQ9NZM4 1560 aa18.93■□□□□ 0.62
SRSF9-204ENST00000548792 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
SRSF9-204ENST00000548792 PIAS4Q8N2W9 510 aaPredicted RBP18.83■□□□□ 0.61
SRSF9-204ENST00000548792 SCRIBQ14160 1630 aa18.71■□□□□ 0.59
SRSF9-204ENST00000548792 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
SRSF9-204ENST00000548792 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
SRSF9-204ENST00000548792 EIF4G1Q04637 1599 aaKnown RBP18.46■□□□□ 0.54
SRSF9-204ENST00000548792 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.53
SRSF9-204ENST00000548792 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
SRSF9-204ENST00000548792 NCAPD3P42695 1498 aa17.86■□□□□ 0.45
SRSF9-204ENST00000548792 ATAD2BQ9ULI0 1458 aa17.82■□□□□ 0.44
SRSF9-204ENST00000548792 SMARCA2P51531 1590 aa17.8■□□□□ 0.44
SRSF9-204ENST00000548792 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.43
SRSF9-204ENST00000548792 HMGXB3Q12766 1538 aa17.77■□□□□ 0.43
SRSF9-204ENST00000548792 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
SRSF9-204ENST00000548792 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
SRSF9-204ENST00000548792 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
SRSF9-204ENST00000548792 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
SRSF9-204ENST00000548792 MROH2BQ7Z745 1585 aa17.62■□□□□ 0.41
SRSF9-204ENST00000548792 CUX2O14529 1486 aa17.6■□□□□ 0.41
SRSF9-204ENST00000548792 NESP48681 1621 aa17.56■□□□□ 0.4
SRSF9-204ENST00000548792 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
SRSF9-204ENST00000548792 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
SRSF9-204ENST00000548792 DNAJC5Q9H3Z4 198 aa17.46■□□□□ 0.39
SRSF9-204ENST00000548792 WIZO95785 1651 aa17.44■□□□□ 0.38
SRSF9-204ENST00000548792 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
SRSF9-204ENST00000548792 THOC2Q8NI27 1593 aaKnown RBP17.42■□□□□ 0.38
SRSF9-204ENST00000548792 KIF21AQ7Z4S6 1674 aa17.41■□□□□ 0.38
SRSF9-204ENST00000548792 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
SRSF9-204ENST00000548792 CACNB1Q02641 598 aaPredicted RBP17.32■□□□□ 0.36
SRSF9-204ENST00000548792 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
SRSF9-204ENST00000548792 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
SRSF9-204ENST00000548792 KCNA4P22459 653 aa17.26■□□□□ 0.35
SRSF9-204ENST00000548792 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
SRSF9-204ENST00000548792 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
SRSF9-204ENST00000548792 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
SRSF9-204ENST00000548792 WDR62O43379 1518 aa17.18■□□□□ 0.34
SRSF9-204ENST00000548792 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
SRSF9-204ENST00000548792 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
SRSF9-204ENST00000548792 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
SRSF9-204ENST00000548792 CFTRP13569 1480 aa17.14■□□□□ 0.33
SRSF9-204ENST00000548792 FANCD2Q9BXW9 1451 aa17.13■□□□□ 0.33
SRSF9-204ENST00000548792 PRDM2Q13029 1718 aa17.08■□□□□ 0.33
SRSF9-204ENST00000548792 CCDC88BA6NC98 1476 aa16.99■□□□□ 0.31
SRSF9-204ENST00000548792 URB2Q14146 1524 aaKnown RBP16.99■□□□□ 0.31
SRSF9-204ENST00000548792 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
SRSF9-204ENST00000548792 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
SRSF9-204ENST00000548792 TOPBP1Q92547 1522 aa16.82■□□□□ 0.28
SRSF9-204ENST00000548792 HOXD11P31277 338 aaPredicted RBP16.82■□□□□ 0.28
SRSF9-204ENST00000548792 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
SRSF9-204ENST00000548792 ABCC8Q09428 1581 aa16.8■□□□□ 0.28
SRSF9-204ENST00000548792 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
SRSF9-204ENST00000548792 ZNF608Q9ULD9 1512 aaPredicted RBP16.76■□□□□ 0.27
SRSF9-204ENST00000548792 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
SRSF9-204ENST00000548792 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
SRSF9-204ENST00000548792 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
SRSF9-204ENST00000548792 TARBP1Q13395 1621 aaKnown RBP16.69■□□□□ 0.26
SRSF9-204ENST00000548792 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
SRSF9-204ENST00000548792 CHD1O14646 1710 aa16.61■□□□□ 0.25
SRSF9-204ENST00000548792 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.253e-12■■■□□ 15.6
SRSF9-204ENST00000548792 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
SRSF9-204ENST00000548792 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
SRSF9-204ENST00000548792 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
SRSF9-204ENST00000548792 RAD54L2Q9Y4B4 1467 aa16.57■□□□□ 0.24
SRSF9-204ENST00000548792 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
SRSF9-204ENST00000548792 SOGA1O94964 1423 aa16.56■□□□□ 0.24
SRSF9-204ENST00000548792 CUX1P39880 1505 aa16.55■□□□□ 0.24
SRSF9-204ENST00000548792 WDR97A6NE52 1622 aa16.55■□□□□ 0.24
SRSF9-204ENST00000548792 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
SRSF9-204ENST00000548792 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
SRSF9-204ENST00000548792 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
SRSF9-204ENST00000548792 FBLN2P98095 1184 aa16.48■□□□□ 0.23
SRSF9-204ENST00000548792 SNAPC4Q5SXM2 1469 aa16.47■□□□□ 0.23
SRSF9-204ENST00000548792 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
SRSF9-204ENST00000548792 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
SRSF9-204ENST00000548792 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
SRSF9-204ENST00000548792 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
SRSF9-204ENST00000548792 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
SRSF9-204ENST00000548792 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms