RNA–Protein interactions for RNA: ENST00000536445.5

POLE-209, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 3

Gene POLE, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-209ENST00000536445 NISCHQ9Y2I1 1504 aa30.28■■■□□ 2.44
POLE-209ENST00000536445 CCDC180Q9P1Z9 1646 aa26.33■■□□□ 1.81
POLE-209ENST00000536445 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
POLE-209ENST00000536445 ZCCHC6Q5VYS8 1495 aaKnown RBP25.37■■□□□ 1.65
POLE-209ENST00000536445 ABCC9O60706 1549 aa25.31■■□□□ 1.64
POLE-209ENST00000536445 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
POLE-209ENST00000536445 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
POLE-209ENST00000536445 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
POLE-209ENST00000536445 NACADO15069 1562 aa24.64■■□□□ 1.54
POLE-209ENST00000536445 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
POLE-209ENST00000536445 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
POLE-209ENST00000536445 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.425e-6■■■■□ 22.2
POLE-209ENST00000536445 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
POLE-209ENST00000536445 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
POLE-209ENST00000536445 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
POLE-209ENST00000536445 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
POLE-209ENST00000536445 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
POLE-209ENST00000536445 MROH2BQ7Z745 1585 aa23.43■■□□□ 1.34
POLE-209ENST00000536445 HRCP23327 699 aa23.41■■□□□ 1.34
POLE-209ENST00000536445 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
POLE-209ENST00000536445 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
POLE-209ENST00000536445 WIZO95785 1651 aa23.21■■□□□ 1.31
POLE-209ENST00000536445 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
POLE-209ENST00000536445 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
POLE-209ENST00000536445 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
POLE-209ENST00000536445 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
POLE-209ENST00000536445 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
POLE-209ENST00000536445 BAZ1BQ9UIG0 1483 aaKnown RBP22.88■■□□□ 1.25
POLE-209ENST00000536445 PELP1Q8IZL8 1130 aaKnown RBP22.87■■□□□ 1.25
POLE-209ENST00000536445 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
POLE-209ENST00000536445 NCAPD3P42695 1498 aa22.79■■□□□ 1.24
POLE-209ENST00000536445 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
POLE-209ENST00000536445 PCGF6Q9BYE7 350 aa22.75■■□□□ 1.23
POLE-209ENST00000536445 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
POLE-209ENST00000536445 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
POLE-209ENST00000536445 PPARGC1BQ86YN6 1023 aaKnown RBP22.64■■□□□ 1.21
POLE-209ENST00000536445 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
POLE-209ENST00000536445 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
POLE-209ENST00000536445 CADPSQ9ULU8 1353 aa22.26■■□□□ 1.15
POLE-209ENST00000536445 ABCC8Q09428 1581 aa22.26■■□□□ 1.15
POLE-209ENST00000536445 CFTRP13569 1480 aa22.26■■□□□ 1.15
POLE-209ENST00000536445 TRIM26Q12899 539 aaPredicted RBP22.2■■□□□ 1.14
POLE-209ENST00000536445 ZEB1P37275 1124 aaPredicted RBP22.17■■□□□ 1.14
POLE-209ENST00000536445 NESP48681 1621 aa22.15■■□□□ 1.14
POLE-209ENST00000536445 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
POLE-209ENST00000536445 MYT1Q01538 1121 aa22.09■■□□□ 1.13
POLE-209ENST00000536445 FAM9AQ8IZU1 332 aaPredicted RBP22.07■■□□□ 1.12
POLE-209ENST00000536445 SCAF1Q9H7N4 1312 aaKnown RBP22.05■■□□□ 1.12
POLE-209ENST00000536445 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
POLE-209ENST00000536445 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
POLE-209ENST00000536445 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
POLE-209ENST00000536445 PRDM2Q13029 1718 aa21.96■■□□□ 1.11
POLE-209ENST00000536445 PDS5BQ9NTI5 1447 aa21.93■■□□□ 1.1
POLE-209ENST00000536445 LOC105371045A0A1W2PR82 267 aa21.9■■□□□ 1.1
POLE-209ENST00000536445 CUX1P39880 1505 aa21.9■■□□□ 1.1
POLE-209ENST00000536445 CEP164Q9UPV0 1460 aa21.87■■□□□ 1.09
POLE-209ENST00000536445 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
POLE-209ENST00000536445 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
POLE-209ENST00000536445 SOGA1O94964 1423 aa21.85■■□□□ 1.09
POLE-209ENST00000536445 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
POLE-209ENST00000536445 RUSC2Q8N2Y8 1516 aa21.77■■□□□ 1.08
POLE-209ENST00000536445 KIF21AQ7Z4S6 1674 aa21.76■■□□□ 1.07
POLE-209ENST00000536445 TOPBP1Q92547 1522 aa21.73■■□□□ 1.07
POLE-209ENST00000536445 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
POLE-209ENST00000536445 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
POLE-209ENST00000536445 FGD5Q6ZNL6 1462 aa21.72■■□□□ 1.07
POLE-209ENST00000536445 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
POLE-209ENST00000536445 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
POLE-209ENST00000536445 EEA1Q15075 1411 aa21.65■■□□□ 1.06
POLE-209ENST00000536445 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
POLE-209ENST00000536445 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
POLE-209ENST00000536445 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
POLE-209ENST00000536445 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
POLE-209ENST00000536445 CUX2O14529 1486 aa21.58■■□□□ 1.05
POLE-209ENST00000536445 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
POLE-209ENST00000536445 UBTFP17480 764 aaKnown RBP21.49■■□□□ 1.03
POLE-209ENST00000536445 TDRD9Q8NDG6 1382 aaKnown RBP21.47■■□□□ 1.03
POLE-209ENST00000536445 WDR62O43379 1518 aa21.47■■□□□ 1.03
POLE-209ENST00000536445 ABCA10Q8WWZ4 1543 aa21.47■■□□□ 1.03
POLE-209ENST00000536445 NEUROD1Q13562 356 aa21.43■■□□□ 1.02
POLE-209ENST00000536445 IGF1RP08069 1367 aa21.43■■□□□ 1.02
POLE-209ENST00000536445 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
POLE-209ENST00000536445 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
POLE-209ENST00000536445 GOLGA3Q08378 1498 aa21.39■■□□□ 1.02
POLE-209ENST00000536445 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
POLE-209ENST00000536445 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
POLE-209ENST00000536445 PRXQ9BXM0 1461 aa21.35■■□□□ 1.01
POLE-209ENST00000536445 KIF21BO75037 1637 aa21.34■■□□□ 1.01
POLE-209ENST00000536445 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
POLE-209ENST00000536445 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
POLE-209ENST00000536445 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1
POLE-209ENST00000536445 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 13e-7■■■■■ 31.3
POLE-209ENST00000536445 GAPVD1Q14C86 1478 aa21.33■■□□□ 1
POLE-209ENST00000536445 TNIKQ9UKE5 1360 aa21.31■■□□□ 1
POLE-209ENST00000536445 WDR97A6NE52 1622 aa21.31■■□□□ 1
POLE-209ENST00000536445 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
POLE-209ENST00000536445 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
POLE-209ENST00000536445 ABCA5Q8WWZ7 1642 aa21.26■□□□□ 0.99
POLE-209ENST00000536445 ERICH3Q5RHP9 1530 aa21.23■□□□□ 0.99
POLE-209ENST00000536445 CEP162Q5TB80 1403 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms