Protein–RNA interactions for Protein: Q7Z443

PKD1L3, Polycystic kidney disease protein 1-like 3, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1L3Q7Z443 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PKD1L3Q7Z443 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PKD1L3Q7Z443 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PKD1L3Q7Z443 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PKD1L3Q7Z443 BX664725.1-201ENST00000438252 379 ntBASIC31.8■■■□□ 2.68
PKD1L3Q7Z443 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PKD1L3Q7Z443 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
PKD1L3Q7Z443 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
PKD1L3Q7Z443 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 UNC93B8-201ENST00000511903 705 ntBASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.78■■■□□ 2.68
PKD1L3Q7Z443 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PKD1L3Q7Z443 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PKD1L3Q7Z443 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
PKD1L3Q7Z443 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.76■■■□□ 2.68
PKD1L3Q7Z443 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
PKD1L3Q7Z443 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.76■■■□□ 2.67
PKD1L3Q7Z443 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PKD1L3Q7Z443 BX255925.1-201ENST00000566954 1854 ntBASIC31.75■■■□□ 2.67
PKD1L3Q7Z443 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.75■■■□□ 2.67
PKD1L3Q7Z443 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PKD1L3Q7Z443 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
PKD1L3Q7Z443 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.74■■■□□ 2.67
PKD1L3Q7Z443 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PKD1L3Q7Z443 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PKD1L3Q7Z443 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
PKD1L3Q7Z443 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PKD1L3Q7Z443 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PKD1L3Q7Z443 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.73■■■□□ 2.67
PKD1L3Q7Z443 MIR4787-201ENST00000607364 84 ntBASIC31.73■■■□□ 2.67
PKD1L3Q7Z443 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.73■■■□□ 2.67
PKD1L3Q7Z443 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
PKD1L3Q7Z443 KRT18P24-201ENST00000344739 1156 ntBASIC31.72■■■□□ 2.67
PKD1L3Q7Z443 KRT16P3-201ENST00000439127 1283 ntBASIC31.72■■■□□ 2.67
PKD1L3Q7Z443 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
PKD1L3Q7Z443 MIR4281-201ENST00000580852 62 ntBASIC31.72■■■□□ 2.67
PKD1L3Q7Z443 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC31.71■■■□□ 2.67
PKD1L3Q7Z443 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.71■■■□□ 2.67
PKD1L3Q7Z443 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PKD1L3Q7Z443 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
PKD1L3Q7Z443 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.67
PKD1L3Q7Z443 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.7■■■□□ 2.67
PKD1L3Q7Z443 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.7■■■□□ 2.66
PKD1L3Q7Z443 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.69■■■□□ 2.66
PKD1L3Q7Z443 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.69■■■□□ 2.66
PKD1L3Q7Z443 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
PKD1L3Q7Z443 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PKD1L3Q7Z443 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PKD1L3Q7Z443 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PKD1L3Q7Z443 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.68■■■□□ 2.66
PKD1L3Q7Z443 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
PKD1L3Q7Z443 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PKD1L3Q7Z443 KRT125P-201ENST00000546827 989 ntBASIC31.67■■■□□ 2.66
PKD1L3Q7Z443 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
PKD1L3Q7Z443 AC137630.3-201ENST00000607245 391 ntBASIC31.67■■■□□ 2.66
PKD1L3Q7Z443 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PKD1L3Q7Z443 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PKD1L3Q7Z443 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.65■■■□□ 2.66
PKD1L3Q7Z443 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
PKD1L3Q7Z443 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
PKD1L3Q7Z443 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.65■■■□□ 2.66
PKD1L3Q7Z443 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PKD1L3Q7Z443 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
PKD1L3Q7Z443 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
PKD1L3Q7Z443 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
PKD1L3Q7Z443 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
PKD1L3Q7Z443 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.63■■■□□ 2.65
PKD1L3Q7Z443 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
PKD1L3Q7Z443 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
PKD1L3Q7Z443 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
PKD1L3Q7Z443 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
PKD1L3Q7Z443 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 AC021242.3-201ENST00000607598 1377 ntBASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 AC120024.1-201ENST00000562672 995 ntBASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.62■■■□□ 2.65
PKD1L3Q7Z443 AC139426.1-201ENST00000568218 2529 ntBASIC31.61■■■□□ 2.65
PKD1L3Q7Z443 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
PKD1L3Q7Z443 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms