Protein–RNA interactions for Protein: Q6ZST4

LCNL1, Lipocalin-like 1 protein, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1Q6ZST4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 AC018755.3-202ENST00000596210 929 ntBASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 MIR6765-201ENST00000614092 87 ntBASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LCNL1Q6ZST4 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LCNL1Q6ZST4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LCNL1Q6ZST4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LCNL1Q6ZST4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.85■□□□□ 0.61
LCNL1Q6ZST4 BHLHE23-202ENST00000612929 1109 ntBASIC18.85■□□□□ 0.61
LCNL1Q6ZST4 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LCNL1Q6ZST4 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LCNL1Q6ZST4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LCNL1Q6ZST4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCNL1Q6ZST4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.82■□□□□ 0.6
LCNL1Q6ZST4 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LCNL1Q6ZST4 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LCNL1Q6ZST4 AC010980.1-201ENST00000587192 1142 ntBASIC18.82■□□□□ 0.6
LCNL1Q6ZST4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LCNL1Q6ZST4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LCNL1Q6ZST4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.81■□□□□ 0.6
LCNL1Q6ZST4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
LCNL1Q6ZST4 AC139795.1-202ENST00000500444 432 ntBASIC18.81■□□□□ 0.6
LCNL1Q6ZST4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
LCNL1Q6ZST4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LCNL1Q6ZST4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCNL1Q6ZST4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LCNL1Q6ZST4 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LCNL1Q6ZST4 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LCNL1Q6ZST4 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.79■□□□□ 0.6
LCNL1Q6ZST4 ERN1-208ENST00000606895 2068 ntBASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LCNL1Q6ZST4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.77■□□□□ 0.6
LCNL1Q6ZST4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCNL1Q6ZST4 KRT8P33-201ENST00000508125 1423 ntBASIC18.77■□□□□ 0.6
LCNL1Q6ZST4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LCNL1Q6ZST4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
LCNL1Q6ZST4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LCNL1Q6ZST4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LCNL1Q6ZST4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 RARRES2P1-201ENST00000474487 481 ntBASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
LCNL1Q6ZST4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.74■□□□□ 0.59
LCNL1Q6ZST4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms