Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.82■■□□□ 1.08
SIRPAP78324 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SIRPAP78324 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPAP78324 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPAP78324 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPAP78324 AC004987.1-201ENST00000428627 508 ntBASIC21.81■■□□□ 1.08
SIRPAP78324 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.81■■□□□ 1.08
SIRPAP78324 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.81■■□□□ 1.08
SIRPAP78324 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.81■■□□□ 1.08
SIRPAP78324 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPAP78324 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPAP78324 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SIRPAP78324 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.81■■□□□ 1.08
SIRPAP78324 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SIRPAP78324 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPAP78324 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.8■■□□□ 1.08
SIRPAP78324 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SIRPAP78324 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPAP78324 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPAP78324 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPAP78324 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.8■■□□□ 1.08
SIRPAP78324 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPAP78324 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.8■■□□□ 1.08
SIRPAP78324 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SIRPAP78324 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIRPAP78324 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
SIRPAP78324 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SIRPAP78324 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SIRPAP78324 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIRPAP78324 TSPY13P-201ENST00000338964 914 ntBASIC21.79■■□□□ 1.08
SIRPAP78324 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SIRPAP78324 ATP5G2P3-201ENST00000429083 425 ntBASIC21.79■■□□□ 1.08
SIRPAP78324 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIRPAP78324 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SIRPAP78324 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPAP78324 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SIRPAP78324 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPAP78324 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPAP78324 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.78■■□□□ 1.08
SIRPAP78324 AC129492.7-201ENST00000622992 756 ntBASIC21.78■■□□□ 1.08
SIRPAP78324 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPAP78324 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SIRPAP78324 AC142472.1-201ENST00000612013 1741 ntBASIC21.77■■□□□ 1.08
SIRPAP78324 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIRPAP78324 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SIRPAP78324 DUX4L18-201ENST00000553347 1267 ntBASIC21.77■■□□□ 1.08
SIRPAP78324 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SIRPAP78324 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SIRPAP78324 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SIRPAP78324 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SIRPAP78324 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SIRPAP78324 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.76■■□□□ 1.07
SIRPAP78324 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPAP78324 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPAP78324 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPAP78324 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPAP78324 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SIRPAP78324 RAP2CP1-202ENST00000605179 643 ntBASIC21.75■■□□□ 1.07
SIRPAP78324 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPAP78324 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SIRPAP78324 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIRPAP78324 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SIRPAP78324 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.74■■□□□ 1.07
SIRPAP78324 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.74■■□□□ 1.07
SIRPAP78324 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SIRPAP78324 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIRPAP78324 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIRPAP78324 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.73■■□□□ 1.07
SIRPAP78324 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SIRPAP78324 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.73■■□□□ 1.07
SIRPAP78324 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SIRPAP78324 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SIRPAP78324 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SIRPAP78324 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPAP78324 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPAP78324 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPAP78324 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPAP78324 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SIRPAP78324 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIRPAP78324 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SIRPAP78324 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SIRPAP78324 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.71■■□□□ 1.07
SIRPAP78324 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.71■■□□□ 1.07
SIRPAP78324 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.71■■□□□ 1.07
SIRPAP78324 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SIRPAP78324 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.71■■□□□ 1.07
SIRPAP78324 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.71■■□□□ 1.07
SIRPAP78324 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SIRPAP78324 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SIRPAP78324 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SIRPAP78324 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SIRPAP78324 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIRPAP78324 DUX4L9-201ENST00000449051 1259 ntBASIC21.7■■□□□ 1.06
SIRPAP78324 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SIRPAP78324 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.7■■□□□ 1.06
SIRPAP78324 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SIRPAP78324 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SIRPAP78324 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SIRPAP78324 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SIRPAP78324 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms