Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PDX1P52945 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.39■■□□□ 1.33
PDX1P52945 THA1P-201ENST00000590384 1145 ntBASIC23.39■■□□□ 1.33
PDX1P52945 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDX1P52945 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDX1P52945 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.38■■□□□ 1.33
PDX1P52945 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.38■■□□□ 1.33
PDX1P52945 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PDX1P52945 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PDX1P52945 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDX1P52945 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDX1P52945 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PDX1P52945 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PDX1P52945 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PDX1P52945 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDX1P52945 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDX1P52945 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
PDX1P52945 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PDX1P52945 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.37■■□□□ 1.33
PDX1P52945 RPS2P7-201ENST00000447334 885 ntBASIC23.37■■□□□ 1.33
PDX1P52945 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.36■■□□□ 1.33
PDX1P52945 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PDX1P52945 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PDX1P52945 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
PDX1P52945 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.35■■□□□ 1.33
PDX1P52945 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDX1P52945 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PDX1P52945 LONRF2P2-201ENST00000439212 571 ntBASIC23.35■■□□□ 1.33
PDX1P52945 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.35■■□□□ 1.33
PDX1P52945 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDX1P52945 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDX1P52945 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDX1P52945 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PDX1P52945 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
PDX1P52945 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PDX1P52945 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PDX1P52945 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
PDX1P52945 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDX1P52945 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDX1P52945 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.33■■□□□ 1.33
PDX1P52945 AL356441.2-201ENST00000443009 864 ntBASIC23.33■■□□□ 1.33
PDX1P52945 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.33■■□□□ 1.33
PDX1P52945 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.33■■□□□ 1.33
PDX1P52945 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PDX1P52945 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDX1P52945 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PDX1P52945 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
PDX1P52945 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.32■■□□□ 1.32
PDX1P52945 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PDX1P52945 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDX1P52945 AL449106.1-201ENST00000608517 1980 ntBASIC23.32■■□□□ 1.32
PDX1P52945 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PDX1P52945 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDX1P52945 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PDX1P52945 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.31■■□□□ 1.32
PDX1P52945 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.31■■□□□ 1.32
PDX1P52945 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.31■■□□□ 1.32
PDX1P52945 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.31■■□□□ 1.32
PDX1P52945 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
PDX1P52945 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.3■■□□□ 1.32
PDX1P52945 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PDX1P52945 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.3■■□□□ 1.32
PDX1P52945 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PDX1P52945 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDX1P52945 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDX1P52945 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
PDX1P52945 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
PDX1P52945 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDX1P52945 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.29■■□□□ 1.32
PDX1P52945 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDX1P52945 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDX1P52945 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
PDX1P52945 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PDX1P52945 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.28■■□□□ 1.32
PDX1P52945 AC239859.2-201ENST00000444165 318 ntBASIC23.28■■□□□ 1.32
PDX1P52945 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDX1P52945 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDX1P52945 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.27■■□□□ 1.32
PDX1P52945 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PDX1P52945 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDX1P52945 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PDX1P52945 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDX1P52945 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDX1P52945 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PDX1P52945 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PDX1P52945 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDX1P52945 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.26■■□□□ 1.31
PDX1P52945 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms