Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.82■□□□□ 0.92
CD40P25942 AC103834.1-201ENST00000520383 144 ntBASIC20.82■□□□□ 0.92
CD40P25942 AC019171.1-201ENST00000601251 1056 ntBASIC20.82■□□□□ 0.92
CD40P25942 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CD40P25942 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.81■□□□□ 0.92
CD40P25942 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 LONRF2P2-201ENST00000439212 571 ntBASIC20.8■□□□□ 0.92
CD40P25942 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 MIR4508-201ENST00000584178 70 ntBASIC20.8■□□□□ 0.92
CD40P25942 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.8■□□□□ 0.92
CD40P25942 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CD40P25942 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CD40P25942 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.79■□□□□ 0.92
CD40P25942 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.79■□□□□ 0.92
CD40P25942 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD40P25942 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD40P25942 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
CD40P25942 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CD40P25942 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CD40P25942 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CD40P25942 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
CD40P25942 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CD40P25942 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD40P25942 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD40P25942 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
CD40P25942 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.77■□□□□ 0.92
CD40P25942 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.77■□□□□ 0.92
CD40P25942 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CD40P25942 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
CD40P25942 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CD40P25942 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CD40P25942 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.76■□□□□ 0.91
CD40P25942 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.76■□□□□ 0.91
CD40P25942 AL451085.2-201ENST00000605085 799 ntBASIC20.76■□□□□ 0.91
CD40P25942 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CD40P25942 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.75■□□□□ 0.91
CD40P25942 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CD40P25942 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.75■□□□□ 0.91
CD40P25942 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD40P25942 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CD40P25942 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CD40P25942 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CD40P25942 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
CD40P25942 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CD40P25942 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.74■□□□□ 0.91
CD40P25942 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40P25942 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40P25942 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD40P25942 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD40P25942 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.73■□□□□ 0.91
CD40P25942 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD40P25942 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.73■□□□□ 0.91
CD40P25942 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CD40P25942 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CD40P25942 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CD40P25942 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD40P25942 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CD40P25942 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40P25942 AC103724.3-201ENST00000564481 992 ntBASIC20.71■□□□□ 0.91
CD40P25942 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.71■□□□□ 0.91
CD40P25942 AL035685.1-201ENST00000636663 812 ntBASIC20.71■□□□□ 0.91
CD40P25942 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.71■□□□□ 0.91
CD40P25942 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40P25942 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CD40P25942 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD40P25942 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
CD40P25942 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CD40P25942 AL031848.2-201ENST00000607670 837 ntBASIC20.69■□□□□ 0.9
CD40P25942 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.69■□□□□ 0.9
CD40P25942 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD40P25942 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD40P25942 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD40P25942 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms