Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.82■□□□□ 0.92
CD40P25942 AC103834.1-201ENST00000520383 144 ntBASIC20.82■□□□□ 0.92
CD40P25942 AC019171.1-201ENST00000601251 1056 ntBASIC20.82■□□□□ 0.92
CD40P25942 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CD40P25942 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CD40P25942 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.81■□□□□ 0.92
CD40P25942 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CD40P25942 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 LONRF2P2-201ENST00000439212 571 ntBASIC20.8■□□□□ 0.92
CD40P25942 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CD40P25942 MIR4508-201ENST00000584178 70 ntBASIC20.8■□□□□ 0.92
CD40P25942 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.8■□□□□ 0.92
CD40P25942 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CD40P25942 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CD40P25942 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.79■□□□□ 0.92
CD40P25942 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.79■□□□□ 0.92
CD40P25942 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD40P25942 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CD40P25942 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.78■□□□□ 0.92
CD40P25942 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CD40P25942 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CD40P25942 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CD40P25942 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
CD40P25942 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CD40P25942 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD40P25942 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CD40P25942 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
CD40P25942 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.77■□□□□ 0.92
CD40P25942 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.77■□□□□ 0.92
CD40P25942 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CD40P25942 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CD40P25942 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.76■□□□□ 0.91
CD40P25942 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CD40P25942 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
CD40P25942 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.76■□□□□ 0.91
CD40P25942 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.76■□□□□ 0.91
CD40P25942 AL451085.2-201ENST00000605085 799 ntBASIC20.76■□□□□ 0.91
CD40P25942 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CD40P25942 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.75■□□□□ 0.91
CD40P25942 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CD40P25942 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.75■□□□□ 0.91
CD40P25942 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CD40P25942 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CD40P25942 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CD40P25942 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CD40P25942 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
CD40P25942 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CD40P25942 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CD40P25942 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.74■□□□□ 0.91
CD40P25942 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40P25942 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.73■□□□□ 0.91
CD40P25942 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD40P25942 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD40P25942 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.73■□□□□ 0.91
CD40P25942 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD40P25942 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.73■□□□□ 0.91
CD40P25942 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CD40P25942 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CD40P25942 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD40P25942 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CD40P25942 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD40P25942 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CD40P25942 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40P25942 AC103724.3-201ENST00000564481 992 ntBASIC20.71■□□□□ 0.91
CD40P25942 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.71■□□□□ 0.91
CD40P25942 AL035685.1-201ENST00000636663 812 ntBASIC20.71■□□□□ 0.91
CD40P25942 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.71■□□□□ 0.91
CD40P25942 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD40P25942 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
CD40P25942 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD40P25942 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.7■□□□□ 0.9
CD40P25942 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CD40P25942 AL031848.2-201ENST00000607670 837 ntBASIC20.69■□□□□ 0.9
CD40P25942 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.69■□□□□ 0.9
CD40P25942 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD40P25942 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD40P25942 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD40P25942 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms