Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
XRCC1P18887 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
XRCC1P18887 AC093323.1-202ENST00000635031 2045 ntBASIC23.89■■□□□ 1.41
XRCC1P18887 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
XRCC1P18887 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
XRCC1P18887 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
XRCC1P18887 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
XRCC1P18887 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.87■■□□□ 1.41
XRCC1P18887 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
XRCC1P18887 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.87■■□□□ 1.41
XRCC1P18887 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
XRCC1P18887 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRCC1P18887 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
XRCC1P18887 AC004987.1-201ENST00000428627 508 ntBASIC23.86■■□□□ 1.41
XRCC1P18887 AL033527.3-201ENST00000566366 1196 ntBASIC23.86■■□□□ 1.41
XRCC1P18887 AC129492.7-201ENST00000622992 756 ntBASIC23.86■■□□□ 1.41
XRCC1P18887 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
XRCC1P18887 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRCC1P18887 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRCC1P18887 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
XRCC1P18887 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
XRCC1P18887 TSPY13P-201ENST00000338964 914 ntBASIC23.85■■□□□ 1.41
XRCC1P18887 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
XRCC1P18887 ATP5G2P3-201ENST00000429083 425 ntBASIC23.85■■□□□ 1.41
XRCC1P18887 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
XRCC1P18887 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.85■■□□□ 1.41
XRCC1P18887 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
XRCC1P18887 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
XRCC1P18887 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
XRCC1P18887 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.84■■□□□ 1.41
XRCC1P18887 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
XRCC1P18887 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.83■■□□□ 1.41
XRCC1P18887 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC1P18887 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC1P18887 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
XRCC1P18887 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC1P18887 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
XRCC1P18887 DUSP8P4-201ENST00000399538 1761 ntBASIC23.83■■□□□ 1.4
XRCC1P18887 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC1P18887 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC1P18887 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC1P18887 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
XRCC1P18887 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
XRCC1P18887 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.82■■□□□ 1.4
XRCC1P18887 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
XRCC1P18887 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
XRCC1P18887 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.82■■□□□ 1.4
XRCC1P18887 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
XRCC1P18887 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
XRCC1P18887 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.81■■□□□ 1.4
XRCC1P18887 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.81■■□□□ 1.4
XRCC1P18887 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
XRCC1P18887 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
XRCC1P18887 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
XRCC1P18887 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
XRCC1P18887 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRCC1P18887 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
XRCC1P18887 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
XRCC1P18887 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.8■■□□□ 1.4
XRCC1P18887 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
XRCC1P18887 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.8■■□□□ 1.4
XRCC1P18887 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
XRCC1P18887 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
XRCC1P18887 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.79■■□□□ 1.4
XRCC1P18887 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRCC1P18887 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
XRCC1P18887 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
XRCC1P18887 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
XRCC1P18887 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.79■■□□□ 1.4
XRCC1P18887 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
XRCC1P18887 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.78■■□□□ 1.4
XRCC1P18887 AC092803.2-201ENST00000564287 1899 ntBASIC23.78■■□□□ 1.4
XRCC1P18887 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.78■■□□□ 1.4
XRCC1P18887 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.77■■□□□ 1.4
XRCC1P18887 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
XRCC1P18887 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
XRCC1P18887 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
XRCC1P18887 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
XRCC1P18887 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
XRCC1P18887 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
XRCC1P18887 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
XRCC1P18887 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
XRCC1P18887 AC142472.1-201ENST00000612013 1741 ntBASIC23.76■■□□□ 1.39
XRCC1P18887 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
XRCC1P18887 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
XRCC1P18887 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
XRCC1P18887 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.75■■□□□ 1.39
XRCC1P18887 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
XRCC1P18887 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.75■■□□□ 1.39
XRCC1P18887 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
XRCC1P18887 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
XRCC1P18887 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
XRCC1P18887 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
XRCC1P18887 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
XRCC1P18887 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.74■■□□□ 1.39
XRCC1P18887 DUX4L9-201ENST00000449051 1259 ntBASIC23.74■■□□□ 1.39
XRCC1P18887 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.74■■□□□ 1.39
XRCC1P18887 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
XRCC1P18887 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
XRCC1P18887 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms