Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
COL1A2P08123 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL1A2P08123 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.69■■□□□ 1.86
COL1A2P08123 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
COL1A2P08123 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL1A2P08123 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
COL1A2P08123 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.69■■□□□ 1.86
COL1A2P08123 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
COL1A2P08123 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
COL1A2P08123 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
COL1A2P08123 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A2P08123 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A2P08123 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A2P08123 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.68■■□□□ 1.86
COL1A2P08123 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A2P08123 AL031848.2-201ENST00000607670 837 ntBASIC26.68■■□□□ 1.86
COL1A2P08123 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
COL1A2P08123 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL1A2P08123 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.67■■□□□ 1.86
COL1A2P08123 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL1A2P08123 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
COL1A2P08123 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
COL1A2P08123 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.66■■□□□ 1.86
COL1A2P08123 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.66■■□□□ 1.86
COL1A2P08123 AC022616.5-201ENST00000518796 181 ntBASIC26.66■■□□□ 1.86
COL1A2P08123 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.66■■□□□ 1.86
COL1A2P08123 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.66■■□□□ 1.86
COL1A2P08123 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.65■■□□□ 1.86
COL1A2P08123 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL1A2P08123 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.65■■□□□ 1.86
COL1A2P08123 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL1A2P08123 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.64■■□□□ 1.86
COL1A2P08123 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL1A2P08123 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL1A2P08123 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
COL1A2P08123 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
COL1A2P08123 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.62■■□□□ 1.85
COL1A2P08123 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.62■■□□□ 1.85
COL1A2P08123 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL1A2P08123 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
COL1A2P08123 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.61■■□□□ 1.85
COL1A2P08123 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A2P08123 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
COL1A2P08123 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A2P08123 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A2P08123 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A2P08123 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL1A2P08123 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A2P08123 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A2P08123 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A2P08123 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL1A2P08123 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.6■■□□□ 1.85
COL1A2P08123 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
COL1A2P08123 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL1A2P08123 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL1A2P08123 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL1A2P08123 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL1A2P08123 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL1A2P08123 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.58■■□□□ 1.85
COL1A2P08123 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.58■■□□□ 1.85
COL1A2P08123 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL1A2P08123 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL1A2P08123 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL1A2P08123 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
COL1A2P08123 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.58■■□□□ 1.84
COL1A2P08123 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL1A2P08123 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
COL1A2P08123 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL1A2P08123 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.56■■□□□ 1.84
COL1A2P08123 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.56■■□□□ 1.84
COL1A2P08123 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.56■■□□□ 1.84
COL1A2P08123 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
COL1A2P08123 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL1A2P08123 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
COL1A2P08123 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL1A2P08123 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL1A2P08123 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL1A2P08123 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL1A2P08123 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL1A2P08123 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.55■■□□□ 1.84
COL1A2P08123 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
COL1A2P08123 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
COL1A2P08123 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL1A2P08123 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.54■■□□□ 1.84
COL1A2P08123 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL1A2P08123 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
COL1A2P08123 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
COL1A2P08123 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
COL1A2P08123 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
COL1A2P08123 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
COL1A2P08123 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.52■■□□□ 1.84
COL1A2P08123 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms