Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC43A1O75387 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC43A1O75387 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC43A1O75387 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
SLC43A1O75387 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC43A1O75387 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC43A1O75387 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC43A1O75387 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC43A1O75387 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC43A1O75387 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC43A1O75387 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC43A1O75387 DUSP8P4-201ENST00000399538 1761 ntBASIC21.66■■□□□ 1.06
SLC43A1O75387 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC43A1O75387 RNF126P1-201ENST00000567452 1320 ntBASIC21.65■■□□□ 1.06
SLC43A1O75387 AC025884.2-201ENST00000553429 711 ntBASIC21.65■■□□□ 1.06
SLC43A1O75387 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC43A1O75387 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC43A1O75387 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC43A1O75387 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.65■■□□□ 1.06
SLC43A1O75387 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC43A1O75387 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC43A1O75387 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC43A1O75387 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC43A1O75387 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC43A1O75387 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SLC43A1O75387 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC43A1O75387 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.64■■□□□ 1.05
SLC43A1O75387 MIR3960-201ENST00000583311 91 ntBASIC21.64■■□□□ 1.05
SLC43A1O75387 HSD17B1P1-201ENST00000590052 955 ntBASIC21.64■■□□□ 1.05
SLC43A1O75387 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC43A1O75387 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC43A1O75387 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC43A1O75387 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
SLC43A1O75387 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
SLC43A1O75387 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 AC092803.2-201ENST00000564287 1899 ntBASIC21.62■■□□□ 1.05
SLC43A1O75387 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SLC43A1O75387 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SLC43A1O75387 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC43A1O75387 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC43A1O75387 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.61■■□□□ 1.05
SLC43A1O75387 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC43A1O75387 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC43A1O75387 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.6■■□□□ 1.05
SLC43A1O75387 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.6■■□□□ 1.05
SLC43A1O75387 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC43A1O75387 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SLC43A1O75387 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC43A1O75387 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC43A1O75387 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC43A1O75387 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC43A1O75387 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC43A1O75387 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.59■■□□□ 1.05
SLC43A1O75387 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC43A1O75387 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC43A1O75387 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SLC43A1O75387 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC43A1O75387 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC43A1O75387 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC43A1O75387 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC43A1O75387 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.58■■□□□ 1.05
SLC43A1O75387 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SLC43A1O75387 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SLC43A1O75387 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.58■■□□□ 1.05
SLC43A1O75387 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC43A1O75387 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC43A1O75387 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC43A1O75387 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SLC43A1O75387 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC43A1O75387 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.57■■□□□ 1.04
SLC43A1O75387 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC43A1O75387 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC43A1O75387 AC007029.1-201ENST00000604183 313 ntBASIC21.57■■□□□ 1.04
SLC43A1O75387 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC43A1O75387 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC43A1O75387 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
SLC43A1O75387 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SLC43A1O75387 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
SLC43A1O75387 RP9P-202ENST00000450133 1212 ntBASIC21.55■■□□□ 1.04
SLC43A1O75387 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SLC43A1O75387 RARRES2P2-201ENST00000394842 485 ntBASIC21.54■■□□□ 1.04
SLC43A1O75387 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms