Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CUBNO60494 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.56■□□□□ 0.72
CUBNO60494 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CUBNO60494 AC092028.1-203ENST00000608262 953 ntBASIC19.56■□□□□ 0.72
CUBNO60494 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CUBNO60494 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CUBNO60494 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CUBNO60494 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.55■□□□□ 0.72
CUBNO60494 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.55■□□□□ 0.72
CUBNO60494 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 WHAMMP3-201ENST00000611636 1609 ntBASIC19.55■□□□□ 0.72
CUBNO60494 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.55■□□□□ 0.72
CUBNO60494 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.55■□□□□ 0.72
CUBNO60494 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CUBNO60494 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
CUBNO60494 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CUBNO60494 AC137630.3-201ENST00000607245 391 ntBASIC19.54■□□□□ 0.72
CUBNO60494 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CUBNO60494 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CUBNO60494 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CUBNO60494 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CUBNO60494 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUBNO60494 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUBNO60494 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CUBNO60494 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
CUBNO60494 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.53■□□□□ 0.72
CUBNO60494 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CUBNO60494 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CUBNO60494 AL031432.3-201ENST00000607698 485 ntBASIC19.52■□□□□ 0.72
CUBNO60494 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CUBNO60494 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.52■□□□□ 0.71
CUBNO60494 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.52■□□□□ 0.71
CUBNO60494 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.51■□□□□ 0.71
CUBNO60494 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.51■□□□□ 0.71
CUBNO60494 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
CUBNO60494 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUBNO60494 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUBNO60494 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CUBNO60494 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CUBNO60494 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CUBNO60494 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CUBNO60494 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.5■□□□□ 0.71
CUBNO60494 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.49■□□□□ 0.71
CUBNO60494 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CUBNO60494 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.49■□□□□ 0.71
CUBNO60494 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.49■□□□□ 0.71
CUBNO60494 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
CUBNO60494 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CUBNO60494 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CUBNO60494 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
CUBNO60494 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CUBNO60494 AC104564.3-201ENST00000582367 638 ntBASIC19.48■□□□□ 0.71
CUBNO60494 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CUBNO60494 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CUBNO60494 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CUBNO60494 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.47■□□□□ 0.71
CUBNO60494 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.47■□□□□ 0.71
CUBNO60494 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.47■□□□□ 0.71
CUBNO60494 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.47■□□□□ 0.71
CUBNO60494 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CUBNO60494 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
CUBNO60494 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CUBNO60494 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CUBNO60494 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CUBNO60494 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CUBNO60494 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CUBNO60494 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CUBNO60494 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CUBNO60494 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CUBNO60494 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CUBNO60494 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CUBNO60494 KRT18P24-201ENST00000344739 1156 ntBASIC19.46■□□□□ 0.71
CUBNO60494 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUBNO60494 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.45■□□□□ 0.7
CUBNO60494 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.45■□□□□ 0.7
CUBNO60494 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUBNO60494 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUBNO60494 SUDS3P1-201ENST00000505831 966 ntBASIC19.45■□□□□ 0.7
CUBNO60494 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.45■□□□□ 0.7
CUBNO60494 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.44■□□□□ 0.7
CUBNO60494 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CUBNO60494 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.44■□□□□ 0.7
CUBNO60494 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.44■□□□□ 0.7
CUBNO60494 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CUBNO60494 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CUBNO60494 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CUBNO60494 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUBNO60494 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CUBNO60494 MIR3621-201ENST00000580529 85 ntBASIC19.43■□□□□ 0.7
CUBNO60494 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CUBNO60494 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUBNO60494 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.43■□□□□ 0.7
CUBNO60494 MIR5787-201ENST00000611784 55 ntBASIC19.43■□□□□ 0.7
CUBNO60494 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms