Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSSCA1O60232 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSSCA1O60232 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.47■□□□□ 0.71
SSSCA1O60232 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
SSSCA1O60232 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSSCA1O60232 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSSCA1O60232 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSSCA1O60232 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.46■□□□□ 0.71
SSSCA1O60232 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSSCA1O60232 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSSCA1O60232 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.45■□□□□ 0.7
SSSCA1O60232 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.45■□□□□ 0.7
SSSCA1O60232 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.45■□□□□ 0.7
SSSCA1O60232 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSSCA1O60232 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SSSCA1O60232 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SSSCA1O60232 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSSCA1O60232 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
SSSCA1O60232 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSSCA1O60232 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSSCA1O60232 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.43■□□□□ 0.7
SSSCA1O60232 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSSCA1O60232 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSSCA1O60232 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSSCA1O60232 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSSCA1O60232 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.43■□□□□ 0.7
SSSCA1O60232 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.43■□□□□ 0.7
SSSCA1O60232 AC012676.1-201ENST00000574705 1949 ntBASIC19.43■□□□□ 0.7
SSSCA1O60232 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSSCA1O60232 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSSCA1O60232 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSSCA1O60232 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
SSSCA1O60232 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSSCA1O60232 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.42■□□□□ 0.7
SSSCA1O60232 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSSCA1O60232 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
SSSCA1O60232 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSSCA1O60232 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSSCA1O60232 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SSSCA1O60232 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SSSCA1O60232 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SSSCA1O60232 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.41■□□□□ 0.7
SSSCA1O60232 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.41■□□□□ 0.7
SSSCA1O60232 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSSCA1O60232 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSSCA1O60232 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SSSCA1O60232 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSSCA1O60232 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSSCA1O60232 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SSSCA1O60232 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SSSCA1O60232 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SSSCA1O60232 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SSSCA1O60232 AP003733.4-201ENST00000623785 1697 ntBASIC19.4■□□□□ 0.7
SSSCA1O60232 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SSSCA1O60232 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SSSCA1O60232 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.39■□□□□ 0.69
SSSCA1O60232 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
SSSCA1O60232 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.39■□□□□ 0.69
SSSCA1O60232 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SSSCA1O60232 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SSSCA1O60232 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSSCA1O60232 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSSCA1O60232 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSSCA1O60232 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSSCA1O60232 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SSSCA1O60232 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.38■□□□□ 0.69
SSSCA1O60232 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SSSCA1O60232 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.38■□□□□ 0.69
SSSCA1O60232 MIR3665-201ENST00000578708 105 ntBASIC19.38■□□□□ 0.69
SSSCA1O60232 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SSSCA1O60232 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSSCA1O60232 AC097639.1-201ENST00000565519 1891 ntBASIC19.37■□□□□ 0.69
SSSCA1O60232 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSSCA1O60232 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SSSCA1O60232 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms