Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.63■■□□□ 1.05
TNFSF11O14788 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TNFSF11O14788 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
TNFSF11O14788 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.62■■□□□ 1.05
TNFSF11O14788 AC092803.2-201ENST00000564287 1899 ntBASIC21.62■■□□□ 1.05
TNFSF11O14788 ERN1-208ENST00000606895 2068 ntBASIC21.62■■□□□ 1.05
TNFSF11O14788 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
TNFSF11O14788 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF11O14788 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TNFSF11O14788 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.62■■□□□ 1.05
TNFSF11O14788 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF11O14788 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF11O14788 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF11O14788 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF11O14788 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF11O14788 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TNFSF11O14788 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.61■■□□□ 1.05
TNFSF11O14788 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.61■■□□□ 1.05
TNFSF11O14788 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TNFSF11O14788 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.6■■□□□ 1.05
TNFSF11O14788 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
TNFSF11O14788 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TNFSF11O14788 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TNFSF11O14788 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.59■■□□□ 1.05
TNFSF11O14788 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.59■■□□□ 1.05
TNFSF11O14788 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TNFSF11O14788 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TNFSF11O14788 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF11O14788 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF11O14788 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF11O14788 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF11O14788 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TNFSF11O14788 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.58■■□□□ 1.05
TNFSF11O14788 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.58■■□□□ 1.04
TNFSF11O14788 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.58■■□□□ 1.04
TNFSF11O14788 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TNFSF11O14788 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFSF11O14788 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF11O14788 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TNFSF11O14788 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.57■■□□□ 1.04
TNFSF11O14788 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.57■■□□□ 1.04
TNFSF11O14788 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF11O14788 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TNFSF11O14788 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF11O14788 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF11O14788 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF11O14788 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF11O14788 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.56■■□□□ 1.04
TNFSF11O14788 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.56■■□□□ 1.04
TNFSF11O14788 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TNFSF11O14788 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF11O14788 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF11O14788 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF11O14788 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFSF11O14788 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF11O14788 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.55■■□□□ 1.04
TNFSF11O14788 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
TNFSF11O14788 AC091060.1-201ENST00000623524 1766 ntBASIC21.55■■□□□ 1.04
TNFSF11O14788 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF11O14788 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TNFSF11O14788 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.55■■□□□ 1.04
TNFSF11O14788 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFSF11O14788 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.54■■□□□ 1.04
TNFSF11O14788 BHLHE23-202ENST00000612929 1109 ntBASIC21.54■■□□□ 1.04
TNFSF11O14788 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF11O14788 AC010501.1-201ENST00000606270 1962 ntBASIC21.54■■□□□ 1.04
TNFSF11O14788 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TNFSF11O14788 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF11O14788 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TNFSF11O14788 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF11O14788 AC139795.1-202ENST00000500444 432 ntBASIC21.53■■□□□ 1.04
TNFSF11O14788 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.53■■□□□ 1.04
TNFSF11O14788 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF11O14788 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TNFSF11O14788 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
TNFSF11O14788 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TNFSF11O14788 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TNFSF11O14788 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.52■■□□□ 1.04
TNFSF11O14788 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.52■■□□□ 1.04
TNFSF11O14788 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.52■■□□□ 1.04
TNFSF11O14788 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.52■■□□□ 1.04
TNFSF11O14788 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.51■■□□□ 1.03
TNFSF11O14788 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF11O14788 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF11O14788 AC096887.2-201ENST00000623443 1957 ntBASIC21.51■■□□□ 1.03
TNFSF11O14788 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
TNFSF11O14788 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF11O14788 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TNFSF11O14788 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF11O14788 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF11O14788 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TNFSF11O14788 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms