Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.46■□□□□ 0.55
NDUFA4O00483 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
NDUFA4O00483 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFA4O00483 AC096887.2-201ENST00000623443 1957 ntBASIC18.46■□□□□ 0.55
NDUFA4O00483 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFA4O00483 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NDUFA4O00483 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
NDUFA4O00483 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA4O00483 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
NDUFA4O00483 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA4O00483 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA4O00483 AC026202.3-201ENST00000600805 1127 ntBASIC18.45■□□□□ 0.54
NDUFA4O00483 RAP2CP1-202ENST00000605179 643 ntBASIC18.45■□□□□ 0.54
NDUFA4O00483 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.45■□□□□ 0.54
NDUFA4O00483 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA4O00483 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NDUFA4O00483 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.45■□□□□ 0.54
NDUFA4O00483 RARRES2P2-201ENST00000394842 485 ntBASIC18.44■□□□□ 0.54
NDUFA4O00483 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NDUFA4O00483 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFA4O00483 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NDUFA4O00483 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFA4O00483 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFA4O00483 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFA4O00483 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFA4O00483 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFA4O00483 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NDUFA4O00483 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFA4O00483 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
NDUFA4O00483 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFA4O00483 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NDUFA4O00483 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFA4O00483 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
NDUFA4O00483 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
NDUFA4O00483 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
NDUFA4O00483 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NDUFA4O00483 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
NDUFA4O00483 KRT18P10-201ENST00000388836 1287 ntBASIC18.4■□□□□ 0.54
NDUFA4O00483 AC133552.2-201ENST00000619106 1032 ntBASIC18.4■□□□□ 0.54
NDUFA4O00483 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NDUFA4O00483 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.4■□□□□ 0.54
NDUFA4O00483 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDUFA4O00483 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFA4O00483 AC009831.1-201ENST00000580420 1582 ntBASIC18.39■□□□□ 0.53
NDUFA4O00483 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFA4O00483 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFA4O00483 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.39■□□□□ 0.53
NDUFA4O00483 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFA4O00483 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFA4O00483 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFA4O00483 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.39■□□□□ 0.53
NDUFA4O00483 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFA4O00483 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFA4O00483 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFA4O00483 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDUFA4O00483 AC097639.1-201ENST00000565519 1891 ntBASIC18.38■□□□□ 0.53
NDUFA4O00483 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NDUFA4O00483 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NDUFA4O00483 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.38■□□□□ 0.53
NDUFA4O00483 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFA4O00483 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFA4O00483 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.38■□□□□ 0.53
NDUFA4O00483 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NDUFA4O00483 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NDUFA4O00483 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.37■□□□□ 0.53
NDUFA4O00483 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.37■□□□□ 0.53
NDUFA4O00483 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFA4O00483 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA4O00483 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA4O00483 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA4O00483 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFA4O00483 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA4O00483 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA4O00483 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDUFA4O00483 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
NDUFA4O00483 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.35■□□□□ 0.53
NDUFA4O00483 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.35■□□□□ 0.53
NDUFA4O00483 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFA4O00483 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NDUFA4O00483 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
NDUFA4O00483 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.34■□□□□ 0.53
NDUFA4O00483 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NDUFA4O00483 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NDUFA4O00483 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.34■□□□□ 0.53
NDUFA4O00483 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.34■□□□□ 0.53
NDUFA4O00483 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms