Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RBFOX3A6NFN3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 AP003733.4-201ENST00000623785 1697 ntBASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.92■□□□□ 0.62
RBFOX3A6NFN3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBFOX3A6NFN3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBFOX3A6NFN3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.91■□□□□ 0.62
RBFOX3A6NFN3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
RBFOX3A6NFN3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RBFOX3A6NFN3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RBFOX3A6NFN3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RBFOX3A6NFN3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RBFOX3A6NFN3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RBFOX3A6NFN3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
RBFOX3A6NFN3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RBFOX3A6NFN3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 WHAMMP2-203ENST00000563942 1603 ntBASIC18.85■□□□□ 0.61
RBFOX3A6NFN3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RBFOX3A6NFN3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms