Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRBV4S1A1TA0A5B7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV4S1A1TA0A5B7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV4S1A1TA0A5B7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV4S1A1TA0A5B7 MIR3960-201ENST00000583311 91 ntBASIC19.23■□□□□ 0.67
TCRBV4S1A1TA0A5B7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV4S1A1TA0A5B7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AC093536.1-201ENST00000569153 554 ntBASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AC026202.3-201ENST00000600805 1127 ntBASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV4S1A1TA0A5B7 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 AC129492.7-201ENST00000622992 756 ntBASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV4S1A1TA0A5B7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 DUX4L18-201ENST00000553347 1267 ntBASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV4S1A1TA0A5B7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
TCRBV4S1A1TA0A5B7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV4S1A1TA0A5B7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV4S1A1TA0A5B7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TCRBV4S1A1TA0A5B7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TCRBV4S1A1TA0A5B7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV4S1A1TA0A5B7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRBV4S1A1TA0A5B7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRBV4S1A1TA0A5B7 AL359504.2-201ENST00000605506 1601 ntBASIC19.14■□□□□ 0.66
TCRBV4S1A1TA0A5B7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
TCRBV4S1A1TA0A5B7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
TCRBV4S1A1TA0A5B7 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms