Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 SPCS2P3-201ENST00000500401 656 ntBASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 AL121749.1-202ENST00000609313 2153 ntBASIC20.24■□□□□ 0.83
TRAV20A0A0B4J274 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV20A0A0B4J274 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRAV20A0A0B4J274 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRAV20A0A0B4J274 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV20A0A0B4J274 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRAV20A0A0B4J274 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.22■□□□□ 0.83
TRAV20A0A0B4J274 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV20A0A0B4J274 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRAV20A0A0B4J274 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 AC010980.1-201ENST00000587192 1142 ntBASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
TRAV20A0A0B4J274 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.18■□□□□ 0.82
TRAV20A0A0B4J274 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
TRAV20A0A0B4J274 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV20A0A0B4J274 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.18■□□□□ 0.82
TRAV20A0A0B4J274 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV20A0A0B4J274 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRAV20A0A0B4J274 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRAV20A0A0B4J274 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 YBX1P4-201ENST00000392794 808 ntBASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRAV20A0A0B4J274 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV20A0A0B4J274 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV20A0A0B4J274 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV20A0A0B4J274 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV20A0A0B4J274 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 AL035685.1-201ENST00000636663 812 ntBASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV20A0A0B4J274 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 AC142086.6-201ENST00000621154 1765 ntBASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 AL451085.2-201ENST00000605085 799 ntBASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV20A0A0B4J274 KRT8P33-201ENST00000508125 1423 ntBASIC20.12■□□□□ 0.81
TRAV20A0A0B4J274 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV20A0A0B4J274 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.12■□□□□ 0.81
TRAV20A0A0B4J274 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV20A0A0B4J274 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV20A0A0B4J274 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV20A0A0B4J274 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.11■□□□□ 0.81
TRAV20A0A0B4J274 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV20A0A0B4J274 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRAV20A0A0B4J274 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRAV20A0A0B4J274 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.11■□□□□ 0.81
TRAV20A0A0B4J274 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRAV20A0A0B4J274 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms