Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV6-8A0A0A6YYG3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 AC060814.1-201ENST00000554326 538 ntBASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 AL157400.5-201ENST00000507624 621 ntBASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-8A0A0A6YYG3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 AC142381.3-201ENST00000568208 1670 ntBASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-8A0A0A6YYG3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MIR3960-201ENST00000583311 91 ntBASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-8A0A0A6YYG3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV6-8A0A0A6YYG3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.64■□□□□ 0.26
TRBV6-8A0A0A6YYG3 AC025884.2-201ENST00000553429 711 ntBASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 SMPD5-203ENST00000639008 1464 ntBASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRBV6-8A0A0A6YYG3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-8A0A0A6YYG3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-8A0A0A6YYG3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV6-8A0A0A6YYG3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV6-8A0A0A6YYG3 REST-210ENST00000638187 1334 ntTSL 5 BASIC16.63■□□□□ 0.25
TRBV6-8A0A0A6YYG3 AC022211.4-201ENST00000625094 2161 ntBASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 AC097639.1-201ENST00000565519 1891 ntBASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV6-8A0A0A6YYG3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-8A0A0A6YYG3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-8A0A0A6YYG3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-8A0A0A6YYG3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-8A0A0A6YYG3 AC092296.2-201ENST00000589470 999 ntBASIC16.61■□□□□ 0.25
TRBV6-8A0A0A6YYG3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV6-8A0A0A6YYG3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-8A0A0A6YYG3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-8A0A0A6YYG3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV6-8A0A0A6YYG3 AC022413.1-201ENST00000624602 984 ntBASIC16.6■□□□□ 0.25
TRBV6-8A0A0A6YYG3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV6-8A0A0A6YYG3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV6-8A0A0A6YYG3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 ECEL1P2-201ENST00000461596 1295 ntBASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV6-8A0A0A6YYG3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.58■□□□□ 0.25
TRBV6-8A0A0A6YYG3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRBV6-8A0A0A6YYG3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-8A0A0A6YYG3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRBV6-8A0A0A6YYG3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms