Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.51■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 AC087393.1-201ENST00000582896 145 ntBASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 YBX1P4-201ENST00000392794 808 ntBASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.47■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 AL451085.2-201ENST00000605085 799 ntBASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRBV23OR9-2A0A075B6M9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.45■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.45■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.42■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 LONRF2P2-201ENST00000439212 571 ntBASIC23.41■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.41■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 AL121749.1-202ENST00000609313 2153 ntBASIC23.4■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.4■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.39■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.39■■□□□ 1.34
TRBV23OR9-2A0A075B6M9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 MIR4508-201ENST00000584178 70 ntBASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.38■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.38■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AC103724.3-201ENST00000564481 992 ntBASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 AL035685.1-201ENST00000636663 812 ntBASIC23.37■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRBV23OR9-2A0A075B6M9 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms