Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.53■□□□□ 0.24
NCLNQ969V3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCLNQ969V3 INTS4P1-201ENST00000438455 1935 ntBASIC16.53■□□□□ 0.24
NCLNQ969V3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NCLNQ969V3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 AC010460.3-201ENST00000511359 1579 ntBASIC16.52■□□□□ 0.24
NCLNQ969V3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.52■□□□□ 0.24
NCLNQ969V3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NCLNQ969V3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.52■□□□□ 0.24
NCLNQ969V3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.52■□□□□ 0.24
NCLNQ969V3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
NCLNQ969V3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.52■□□□□ 0.24
NCLNQ969V3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 FAM220CP-201ENST00000395253 831 ntBASIC16.52■□□□□ 0.24
NCLNQ969V3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.52■□□□□ 0.24
NCLNQ969V3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.52■□□□□ 0.24
NCLNQ969V3 TPM4P1-201ENST00000436100 807 ntBASIC16.52■□□□□ 0.24
NCLNQ969V3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.52■□□□□ 0.24
NCLNQ969V3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.52■□□□□ 0.24
NCLNQ969V3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.52■□□□□ 0.24
NCLNQ969V3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.52■□□□□ 0.24
NCLNQ969V3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.52■□□□□ 0.24
NCLNQ969V3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.52■□□□□ 0.24
NCLNQ969V3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.52■□□□□ 0.24
NCLNQ969V3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.52■□□□□ 0.24
NCLNQ969V3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCLNQ969V3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NCLNQ969V3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
NCLNQ969V3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.52■□□□□ 0.23
NCLNQ969V3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NCLNQ969V3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NCLNQ969V3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCLNQ969V3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NCLNQ969V3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.51■□□□□ 0.23
NCLNQ969V3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NCLNQ969V3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 AC004870.1-201ENST00000315132 882 ntBASIC16.51■□□□□ 0.23
NCLNQ969V3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.51■□□□□ 0.23
NCLNQ969V3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.51■□□□□ 0.23
NCLNQ969V3 EMBP1-201ENST00000458200 901 ntBASIC16.51■□□□□ 0.23
NCLNQ969V3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.51■□□□□ 0.23
NCLNQ969V3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.51■□□□□ 0.23
NCLNQ969V3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.51■□□□□ 0.23
NCLNQ969V3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.51■□□□□ 0.23
NCLNQ969V3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NCLNQ969V3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NCLNQ969V3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.51■□□□□ 0.23
NCLNQ969V3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.51■□□□□ 0.23
NCLNQ969V3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.51■□□□□ 0.23
NCLNQ969V3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms