Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.63□□□□□ -0.07
AP3S2P59780 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
AP3S2P59780 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 FAM197Y1-201ENST00000421178 764 ntBASIC14.63□□□□□ -0.07
AP3S2P59780 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 CCR12P-201ENST00000446203 998 ntBASIC14.63□□□□□ -0.07
AP3S2P59780 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.63□□□□□ -0.07
AP3S2P59780 AC142086.2-201ENST00000569753 217 ntBASIC14.63□□□□□ -0.07
AP3S2P59780 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.63□□□□□ -0.07
AP3S2P59780 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.63□□□□□ -0.07
AP3S2P59780 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.63□□□□□ -0.07
AP3S2P59780 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
AP3S2P59780 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
AP3S2P59780 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
AP3S2P59780 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S2P59780 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
AP3S2P59780 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.62□□□□□ -0.07
AP3S2P59780 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.62□□□□□ -0.07
AP3S2P59780 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.62□□□□□ -0.07
AP3S2P59780 MMAB-206ENST00000540016 945 ntTSL 3 BASIC14.62□□□□□ -0.07
AP3S2P59780 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.62□□□□□ -0.07
AP3S2P59780 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.62□□□□□ -0.07
AP3S2P59780 AL109923.1-201ENST00000618799 583 ntBASIC14.62□□□□□ -0.07
AP3S2P59780 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.62□□□□□ -0.07
AP3S2P59780 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.62□□□□□ -0.07
AP3S2P59780 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
AP3S2P59780 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.62□□□□□ -0.07
AP3S2P59780 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP3S2P59780 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.62□□□□□ -0.07
AP3S2P59780 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S2P59780 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.61□□□□□ -0.07
AP3S2P59780 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.61□□□□□ -0.07
AP3S2P59780 AC138969.2-201ENST00000532739 9932 ntBASIC14.61□□□□□ -0.07
AP3S2P59780 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP3S2P59780 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.61□□□□□ -0.07
AP3S2P59780 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP3S2P59780 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP3S2P59780 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms