Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AL136317.3-201ENST00000618497 906 ntBASIC17.65■□□□□ 0.42
EPHB3P54753 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 Z92544.3-201ENST00000624747 417 ntBASIC17.65■□□□□ 0.42
EPHB3P54753 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EPHB3P54753 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EPHB3P54753 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EPHB3P54753 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.64■□□□□ 0.42
EPHB3P54753 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EPHB3P54753 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EPHB3P54753 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.64■□□□□ 0.42
EPHB3P54753 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
EPHB3P54753 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
EPHB3P54753 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
EPHB3P54753 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHB3P54753 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHB3P54753 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
EPHB3P54753 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 MIR3197-201ENST00000582241 73 ntBASIC17.64■□□□□ 0.41
EPHB3P54753 AC015911.4-201ENST00000588022 1070 ntBASIC17.64■□□□□ 0.41
EPHB3P54753 AC092364.2-202ENST00000597012 1073 ntBASIC17.64■□□□□ 0.41
EPHB3P54753 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHB3P54753 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.64■□□□□ 0.41
EPHB3P54753 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EPHB3P54753 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHB3P54753 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHB3P54753 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.64■□□□□ 0.41
EPHB3P54753 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EPHB3P54753 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EPHB3P54753 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
EPHB3P54753 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 RBPMS2P1-201ENST00000437762 623 ntBASIC17.63■□□□□ 0.41
EPHB3P54753 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.63■□□□□ 0.41
EPHB3P54753 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHB3P54753 LINC01225-203ENST00000563550 1244 ntBASIC17.63■□□□□ 0.41
EPHB3P54753 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.63■□□□□ 0.41
EPHB3P54753 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 CYP2A7P1-201ENST00000595391 815 ntBASIC17.63■□□□□ 0.41
EPHB3P54753 AP001059.3-201ENST00000619053 235 ntBASIC17.63■□□□□ 0.41
EPHB3P54753 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
EPHB3P54753 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
EPHB3P54753 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
EPHB3P54753 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.63■□□□□ 0.41
EPHB3P54753 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB3P54753 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
EPHB3P54753 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.62■□□□□ 0.41
EPHB3P54753 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB3P54753 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
EPHB3P54753 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms