Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH16O75309 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
CDH16O75309 AL138831.2-201ENST00000606564 490 ntBASIC17.2■□□□□ 0.34
CDH16O75309 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH16O75309 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH16O75309 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH16O75309 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH16O75309 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH16O75309 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CDH16O75309 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.2■□□□□ 0.34
CDH16O75309 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CDH16O75309 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.2■□□□□ 0.34
CDH16O75309 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.2■□□□□ 0.34
CDH16O75309 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDH16O75309 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH16O75309 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH16O75309 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.19■□□□□ 0.34
CDH16O75309 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDH16O75309 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH16O75309 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH16O75309 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDH16O75309 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH16O75309 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.19■□□□□ 0.34
CDH16O75309 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDH16O75309 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH16O75309 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH16O75309 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDH16O75309 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CDH16O75309 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CDH16O75309 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CDH16O75309 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 AC003669.1-201ENST00000334569 611 ntBASIC17.18■□□□□ 0.34
CDH16O75309 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH16O75309 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.18■□□□□ 0.34
CDH16O75309 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 AC010203.1-204ENST00000548782 407 ntBASIC17.18■□□□□ 0.34
CDH16O75309 LINC01238-205ENST00000567549 1107 ntBASIC17.18■□□□□ 0.34
CDH16O75309 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.18■□□□□ 0.34
CDH16O75309 AC011558.1-201ENST00000623459 338 ntBASIC17.18■□□□□ 0.34
CDH16O75309 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH16O75309 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH16O75309 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDH16O75309 LINC00895-201ENST00000629028 1637 ntBASIC17.18■□□□□ 0.34
CDH16O75309 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH16O75309 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDH16O75309 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms