Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.02□□□□□ -0.33
COLCA2A8K830 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.02□□□□□ -0.33
COLCA2A8K830 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.02□□□□□ -0.33
COLCA2A8K830 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
COLCA2A8K830 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.02□□□□□ -0.33
COLCA2A8K830 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.02□□□□□ -0.33
COLCA2A8K830 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.02□□□□□ -0.33
COLCA2A8K830 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
COLCA2A8K830 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC13.02□□□□□ -0.33
COLCA2A8K830 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
COLCA2A8K830 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 RPP21-222ENST00000433076 577 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.01□□□□□ -0.33
COLCA2A8K830 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.01□□□□□ -0.33
COLCA2A8K830 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.01□□□□□ -0.33
COLCA2A8K830 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.01□□□□□ -0.33
COLCA2A8K830 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 AC004854.2-201ENST00000608450 1441 ntBASIC13.01□□□□□ -0.33
COLCA2A8K830 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.01□□□□□ -0.33
COLCA2A8K830 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 AC099521.3-201ENST00000624251 2938 ntBASIC13.01□□□□□ -0.33
COLCA2A8K830 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
COLCA2A8K830 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
COLCA2A8K830 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13□□□□□ -0.33
COLCA2A8K830 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
COLCA2A8K830 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
COLCA2A8K830 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
COLCA2A8K830 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13□□□□□ -0.33
COLCA2A8K830 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13□□□□□ -0.33
COLCA2A8K830 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13□□□□□ -0.33
COLCA2A8K830 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
COLCA2A8K830 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms