Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
DUXBA0A1W2PPF3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
DUXBA0A1W2PPF3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
DUXBA0A1W2PPF3 KRT18P22-201ENST00000402024 1347 ntBASIC13.9□□□□□ -0.19
DUXBA0A1W2PPF3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 AC002310.6-201ENST00000624451 1377 ntBASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 SPDYE15P-201ENST00000424157 909 ntBASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 AC005332.3-201ENST00000589904 676 ntBASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
DUXBA0A1W2PPF3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 AC073912.3-201ENST00000624414 853 ntBASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
DUXBA0A1W2PPF3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms