Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 AC117947.1-201ENST00000427448 529 ntBASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 AC122714.2-201ENST00000502787 707 ntBASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV5A0A0B4J249 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 AC103564.2-201ENST00000432853 1299 ntBASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 BX664615.1-201ENST00000443558 458 ntBASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRAV5A0A0B4J249 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV5A0A0B4J249 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms