Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 AC010654.1-201ENST00000615722 808 ntBASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL4A3BPQ9Y5P4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 FRMD8P1-201ENST00000440433 1524 ntBASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 KRT18P2-201ENST00000447938 1258 ntBASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 AC040169.1-201ENST00000565382 521 ntBASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
COL4A3BPQ9Y5P4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 HCG4B-203ENST00000450128 991 ntBASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
COL4A3BPQ9Y5P4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
COL4A3BPQ9Y5P4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms