Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 AC046158.3-201ENST00000624947 2558 ntBASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
MRPS28Q9Y2Q9 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 AL391256.1-201ENST00000443260 1855 ntBASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MRPS28Q9Y2Q9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 AL391005.1-201ENST00000623953 2435 ntBASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 AC011467.2-201ENST00000598425 242 ntBASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 AD001527.2-201ENST00000622994 785 ntBASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 LINC02199-201ENST00000506655 2702 ntBASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MRPS28Q9Y2Q9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms