Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 MRPL20P1-201ENST00000400819 433 ntBASIC16.69■□□□□ 0.26
SATB2Q9UPW6 IGLL3P-201ENST00000412472 434 ntBASIC16.69■□□□□ 0.26
SATB2Q9UPW6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 AC092364.2-202ENST00000597012 1073 ntBASIC16.69■□□□□ 0.26
SATB2Q9UPW6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 AC004877.2-201ENST00000623941 599 ntBASIC16.69■□□□□ 0.26
SATB2Q9UPW6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.69■□□□□ 0.26
SATB2Q9UPW6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 PDPK2P-202ENST00000562415 1191 ntBASIC16.68■□□□□ 0.26
SATB2Q9UPW6 AL031432.2-201ENST00000566714 459 ntBASIC16.68■□□□□ 0.26
SATB2Q9UPW6 AL928711.1-201ENST00000570165 459 ntBASIC16.68■□□□□ 0.26
SATB2Q9UPW6 AC010507.1-201ENST00000633895 436 ntBASIC16.68■□□□□ 0.26
SATB2Q9UPW6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 BCAR1-209ENST00000546196 1340 ntBASIC16.68■□□□□ 0.26
SATB2Q9UPW6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SATB2Q9UPW6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 MIR770-201ENST00000390219 98 ntBASIC16.67■□□□□ 0.26
SATB2Q9UPW6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.67■□□□□ 0.26
SATB2Q9UPW6 FAM8A3P-201ENST00000427218 844 ntBASIC16.67■□□□□ 0.26
SATB2Q9UPW6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.67■□□□□ 0.26
SATB2Q9UPW6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms